Ss1.1-rhyp21c_p16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGAAGAGCCGGCACCCGCTGTGGGAGGCGCGGTGACGGCGGCCGAAGCAACCTTGAGA GGCGAGCGCAGCCGCCATGGCCGAGTTCCCGTCTAAAGTGAGCACGCGGACCAGCAGCCC CGCGCAAGGAGGCGCCGCGGTCTCCGCGCTGCGCCCGGACCTGGGTTTCGTGCGCTCCAG CCTTGGGGCGCTCATGCTGCTGCAACTGGTGCTGGGGCTGCTGGTGTGGGCCCTGATCGC CGACACCCCGTACCACCTGTACCCGGCCTATGGCTGGGTGATGTTCGTTGCTGTCTTCCT CTGGCTGGTGACAATCGTCTTCTTCATCCTCTACCTGTTTCAGCTGCACATGAAGCTGTA CATGGTGCCCTGGCCGCTGGTGTTGATGATATTTAACGTGGGCGCCACCCTTCTCTACAT CACGGCCTTCATCACCTGCAGCGCTTCAGTTGAGCTGACGTCCCTGAAGGGCACCCGGCG GTACAACCAGCAGGCAGCTGCCTCTTTCTTTTCCTGTTTAGTGATGATTGCCTATGGAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGAAGAGCCGGCACCCGCTGTGGGAGGCGCGGTGACGGCGGCCGAAGCAACCTTGAGA GGCGAGCGCAGCCGCCATGGCCGAGTTCCCGTCTAAAGTGAGCACGCGGACCAGCAGCCC CGCGCAAGGAGGCGCCGCGGTCTCCGCGCTGCGCCCGGACCTGGGTTTCGTGCGCTCCAG CCTTGGGGCGCTCATGCTGCTGCAACTGGTGCTGGGGCTGCTGGTGTGGGCCCTGATCGC CGACACCCCGTACCACCTGTACCCGGCCTATGGCTGGGTGATGTTCGTTGCTGTCTTCCT CTGGCTGGTGACAATCGTCTTCTTCATCCTCTACCTGTTTCAGCTGCACATGAAGCTGTA CATGGTGCCCTGGCCGCTGGTGTTGATGATATTTAACGTGGGCGCCACCCTTCTCTACAT CACGGCCTTCATCACCTGCAGCGCTTCAGTTGAGCTGACGTCCCTGAAGGGCACCCGGCG GTACAACCAGCAGGCAGCTGCCTCTTTCTTTTCCTGTTTAGTGATGATTGCCTATGGAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 208-386, gnl|bosTau2|chr18 (24152623-24152801) | |
| 208-386, gnl|canFam2|chr2 (61999961-61999836) | |
| 208-386, gnl|canFam2|chr2 (61999956-61999837) | |
| 208-386, gnl|danRer3|chr18 (22935110-22934985) | |
| 208-386, gnl|dasNov1|scaffold_139660 (3095-2970) | |
| 208-386, gnl|dasNov1|scaffold_139660 (3090-2971) | |
| 208-386, gnl|echTel1|scaffold_317138 (717-592) | |
| 208-386, gnl|echTel1|scaffold_317138 (712-593) | |
| 208-386, gnl|galGal2|chr11 (751892-752017) | |
| 208-386, gnl|hg17|chr16 (55853306-55853431) | |
| 208-386, gnl|Hg17|chr16 (55853484-55853306) | |
| 208-386, gnl|hg17|chrX (44997266-44997385) | |
| 208-386, gnl|loxAfr1|scaffold_2911 (90966-91096) | |
| 208-386, gnl|loxAfr1|scaffold_2911 (90971-91095) | |
| 208-386, gnl|mm7|chr8 (93268385-93268510) | |
| 208-386, gnl|mm7|chr8 (93268390-93268509) | |
| 208-386, gnl|Mm7|chr8 (93268563-93268385) | |
| 208-386, gnl|monDom2|scaffold_35 (24213777-24213902) | |
| 208-386, gnl|monDom2|scaffold_35 (24213781-24213901) | |
| 208-386, gnl|oryCun1|scaffold_82701 (6601-6726) | |
| 208-386, gnl|oryCun1|scaffold_82701 (6606-6725) | |
| 208-386, gnl|panTro1|chr18 (49954091-49954216) | |
| 208-386, gnl|panTro1|chrX (46471786-46471905) | |
| 208-386, gnl|rheMac2|chr20 (55623231-55623356) | |
| 208-386, gnl|rheMac2|chrX (43159912-43160031) | |
| 208-386, gnl|rn3|chr19 (10776325-10776200) | |
| 208-386, gnl|rn3|chr19 (10776320-10776201) | |
| 208-386, gnl|tetNig1|chr13 (929035-928910) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 208-386, gnl|bosTau2|chr18 (24152623-24152801) | |
| 208-386, gnl|canFam2|chr2 (61999961-61999836) | |
| 208-386, gnl|canFam2|chr2 (61999956-61999837) | |
| 208-386, gnl|danRer3|chr18 (22935110-22934985) | |
| 208-386, gnl|dasNov1|scaffold_139660 (3095-2970) | |
| 208-386, gnl|dasNov1|scaffold_139660 (3090-2971) | |
| 208-386, gnl|echTel1|scaffold_317138 (717-592) | |
| 208-386, gnl|echTel1|scaffold_317138 (712-593) | |
| 208-386, gnl|galGal2|chr11 (751892-752017) | |
| 208-386, gnl|hg17|chr16 (55853306-55853431) | |
| 208-386, gnl|Hg17|chr16 (55853484-55853306) | |
| 208-386, gnl|hg17|chrX (44997266-44997385) | |
| 208-386, gnl|loxAfr1|scaffold_2911 (90966-91096) | |
| 208-386, gnl|loxAfr1|scaffold_2911 (90971-91095) | |
| 208-386, gnl|mm7|chr8 (93268385-93268510) | |
| 208-386, gnl|mm7|chr8 (93268390-93268509) | |
| 208-386, gnl|Mm7|chr8 (93268563-93268385) | |
| 208-386, gnl|monDom2|scaffold_35 (24213777-24213902) | |
| 208-386, gnl|monDom2|scaffold_35 (24213781-24213901) | |
| 208-386, gnl|oryCun1|scaffold_82701 (6601-6726) | |
| 208-386, gnl|oryCun1|scaffold_82701 (6606-6725) | |
| 208-386, gnl|panTro1|chr18 (49954091-49954216) | |
| 208-386, gnl|panTro1|chrX (46471786-46471905) | |
| 208-386, gnl|rheMac2|chr20 (55623231-55623356) | |
| 208-386, gnl|rheMac2|chrX (43159912-43160031) | |
| 208-386, gnl|rn3|chr19 (10776325-10776200) | |
| 208-386, gnl|rn3|chr19 (10776320-10776201) | |
| 208-386, gnl|tetNig1|chr13 (929035-928910) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| mcp (0.170648) | |
| fhi (0.169578) | |
| hyp (0.142837) | |
| ebs (0.118301) | |
| cty (0.10408) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) | |
| fhi (0.169578) | |
| hyp (0.142837) | |
| ebs (0.118301) | |
| cty (0.10408) |