Non-Coding RNA Search

Ss1.1-rhyp22c_n21.5

Sequence:


               
               GAAGTATCAAGCACCAAACGTGCACACATCTACCCAGGTGCCCAGAGAGACATGGGCAAG
TGGGTTTCCTGTTGTGCTTGCTTTGAAGCCAAAGTGGAAATTCAGGTTCTAAACTTATGT
GAGGCCCTTGAGGGACACTCCCGGGAAGGAGGGGCTAGTTTCCTTCTGAGACATTCTTTC
TGCTCCCCTCACTCTGGAAGACATAGATGAATGCAGCCAGGACCCAGGCCTGTGCCTTCC
CCACGGGGCCTGCGAGAACCTGCAGGGCTCCTACGTTTGCATCTGCGATGAGGGCTTCAC
GCCCACCCAGGACCAGCACGGCTGTGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTG
CTACCTTAACTTCGACGACACCGTGTTCTGCGATAGTGTACTGGCCACCAATGTCACCCA
GCAGGAGTGCTGCTGCTCGCTGGGGGCTGGTTGGGGAGACCACTGCGAGATCTACCCCTG
CCCAGTCTACAGCTCAGCTGAGTTCCACAGCCTCTGCCCCGACGGGAAGGGCTACACCCA
GGACAACAATATCGTCAACTATGGCATCCCGGCCCACCGTGACATCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGTATCAAGCACCAAACGTGCACACATCTACCCAGGTGCCCAGAGAGACATGGGCAAG
TGGGTTTCCTGTTGTGCTTGCTTTGAAGCCAAAGTGGAAATTCAGGTTCTAAACTTATGT
GAGGCCCTTGAGGGACACTCCCGGGAAGGAGGGGCTAGTTTCCTTCTGAGACATTCTTTC
TGCTCCCCTCACTCTGGAAGACATAGATGAATGCAGCCAGGACCCAGGCCTGTGCCTTCC
CCACGGGGCCTGCGAGAACCTGCAGGGCTCCTACGTTTGCATCTGCGATGAGGGCTTCAC
GCCCACCCAGGACCAGCACGGCTGTGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTG
CTACCTTAACTTCGACGACACCGTGTTCTGCGATAGTGTACTGGCCACCAATGTCACCCA
GCAGGAGTGCTGCTGCTCGCTGGGGGCTGGTTGGGGAGACCACTGCGAGATCTACCCCTG
CCCAGTCTACAGCTCAGCTGAGTTCCACAGCCTCTGCCCCGACGGGAAGGGCTACACCCA
GGACAACAATATCGTCAACTATGGCATCCCGGCCCACCGTGACATCGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               11-329, gnl|bosTau2|chr29 (38643760-38643445)
               

               
               11-329, gnl|Hg17|chr11 (65065978-65065647)
               

               
               11-329, gnl|Mm7|chr19 (5650164-5650480)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-329, gnl|bosTau2|chr29 (38643760-38643445)
               

               
               11-329, gnl|Hg17|chr11 (65065978-65065647)
               

               
               11-329, gnl|Mm7|chr19 (5650164-5650480)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hyp (0.142837)
               

               
               pla (0.133672)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               pla (0.133672)

	11-329, gnl\|bosTau2\|chr29 (38643760-38643445)
	11-329, gnl\|Hg17\|chr11 (65065978-65065647)
	11-329, gnl\|Mm7\|chr19 (5650164-5650480)