Ss1.1-rhyp22c_p7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGGCTGTCATAGGAAATGAATTAGTCTATATAAACAAAACAGTATCTGACACAGAGTAA CAGGGCTGGGCTGGATGAAGAAATGCTACCAGATGATTGACAGACGGTTGCGGAAGAATT TAAAATCATTCATCATTGTTCATCCATCTTGGTTCATCAGAACAATCCTTGCAGTTACAC GACCTTTTATAAGTTCAAAATTCAGCAGTAAAATTAAATATGTCAGTAGCTTATCGGAAC TCAGTGGGCTGATCCCAATGGATTGCATCCATATTCCAGAGAGCATCATCAATATTCATC TGAAGCTGAAAGAAAAACTCTAGGTGGCCATGGCTGGACGAAGATGCCTCTCTGCTTCAT GGTTCTGTTTAAACATATCTACCTGGAAGAGACAGGGCTGATGGTACTTTTTTTCCACTT TGCACTACCTGGTGCCATTCTAAATTTCTAAGGGGAAAAACAGTAAGAGAATTTGTTTAC TCTTAACATGTTTTGTGAAACTGTATATTTTGCTATTTTGCCAATGATGTGCCTCAGAGA TTTCAGTTGAACTTTAGCAAGAAAATAGGACCTTCCATTTCAATATTTCCTTAACCCTTG GTGGTGCAGTGGTATTTTGTTTCTTAGACTGGTGTTGACCACTAAGCTAACTTCAGTCCA CTCAGCATTGGGTGTGGATTTGCTTCCATAGATTAGCTGGATTTCTCCTCAGTGATCAAC TTAGATTTAAAATACATAGGGCTTAACTCTCCCTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGGCTGTCATAGGAAATGAATTAGTCTATATAAACAAAACAGTATCTGACACAGAGTAA CAGGGCTGGGCTGGATGAAGAAATGCTACCAGATGATTGACAGACGGTTGCGGAAGAATT TAAAATCATTCATCATTGTTCATCCATCTTGGTTCATCAGAACAATCCTTGCAGTTACAC GACCTTTTATAAGTTCAAAATTCAGCAGTAAAATTAAATATGTCAGTAGCTTATCGGAAC TCAGTGGGCTGATCCCAATGGATTGCATCCATATTCCAGAGAGCATCATCAATATTCATC TGAAGCTGAAAGAAAAACTCTAGGTGGCCATGGCTGGACGAAGATGCCTCTCTGCTTCAT GGTTCTGTTTAAACATATCTACCTGGAAGAGACAGGGCTGATGGTACTTTTTTTCCACTT TGCACTACCTGGTGCCATTCTAAATTTCTAAGGGGAAAAACAGTAAGAGAATTTGTTTAC TCTTAACATGTTTTGTGAAACTGTATATTTTGCTATTTTGCCAATGATGTGCCTCAGAGA TTTCAGTTGAACTTTAGCAAGAAAATAGGACCTTCCATTTCAATATTTCCTTAACCCTTG GTGGTGCAGTGGTATTTTGTTTCTTAGACTGGTGTTGACCACTAAGCTAACTTCAGTCCA CTCAGCATTGGGTGTGGATTTGCTTCCATAGATTAGCTGGATTTCTCCTCAGTGATCAAC TTAGATTTAAAATACATAGGGCTTAACTCTCCCTAG |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 185-292, gnl|bosTau2|chr8 (24430208-24430315) | |
| 185-292, gnl|canFam2|chr1 (84955420-84955301) | |
| 185-292, gnl|danRer3|chr24 (25840142-25840029) | |
| 185-292, gnl|dasNov1|scaffold_30855 (15473-15592) | |
| 185-292, gnl|echTel1|scaffold_230032 (3591-3472) | |
| 185-292, gnl|fr1|chrUn (18633538-18633653) | |
| 185-292, gnl|galGal2|chrZ (17892270-17892389) | |
| 185-292, gnl|hg17|chr9 (76473656-76473775) | |
| 185-292, gnl|Hg17|chr9 (76473769-76473662) | |
| 185-292, gnl|loxAfr1|scaffold_10270 (17189-17308) | |
| 185-292, gnl|mm7|chr19 (16909265-16909146) | |
| 185-292, gnl|Mm7|chr19 (16909150-16909257) | |
| 185-292, gnl|monDom2|scaffold_80 (4252272-4252396) | |
| 185-292, gnl|oryCun1|scaffold_199663 (34884-34766) | |
| 185-292, gnl|panTro1|chr11_random (39385213-39385332) | |
| 185-292, gnl|rheMac2|chr15 (85376157-85376276) | |
| 185-292, gnl|rn3|chr1 (220875399-220875283) | |
| 185-292, gnl|tetNig1|chr4 (3864685-3864566) | |
| 185-292, gnl|xenTro1|scaffold_910 (203638-203757) | |
| 293-681, gnl|bosTau2|chr8 (24444729-24445120) | |
| 293-681, gnl|Hg17|chr9 (76459070-76458688) | |
| 293-681, gnl|Mm7|chr19 (16921712-16922105) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 185-292, gnl|bosTau2|chr8 (24430208-24430315) | |
| 185-292, gnl|canFam2|chr1 (84955420-84955301) | |
| 185-292, gnl|danRer3|chr24 (25840142-25840029) | |
| 185-292, gnl|dasNov1|scaffold_30855 (15473-15592) | |
| 185-292, gnl|echTel1|scaffold_230032 (3591-3472) | |
| 185-292, gnl|fr1|chrUn (18633538-18633653) | |
| 185-292, gnl|galGal2|chrZ (17892270-17892389) | |
| 185-292, gnl|hg17|chr9 (76473656-76473775) | |
| 185-292, gnl|Hg17|chr9 (76473769-76473662) | |
| 185-292, gnl|loxAfr1|scaffold_10270 (17189-17308) | |
| 185-292, gnl|mm7|chr19 (16909265-16909146) | |
| 185-292, gnl|Mm7|chr19 (16909150-16909257) | |
| 185-292, gnl|monDom2|scaffold_80 (4252272-4252396) | |
| 185-292, gnl|oryCun1|scaffold_199663 (34884-34766) | |
| 185-292, gnl|panTro1|chr11_random (39385213-39385332) | |
| 185-292, gnl|rheMac2|chr15 (85376157-85376276) | |
| 185-292, gnl|rn3|chr1 (220875399-220875283) | |
| 185-292, gnl|tetNig1|chr4 (3864685-3864566) | |
| 185-292, gnl|xenTro1|scaffold_910 (203638-203757) | |
| 293-681, gnl|bosTau2|chr8 (24444729-24445120) | |
| 293-681, gnl|Hg17|chr9 (76459070-76458688) | |
| 293-681, gnl|Mm7|chr19 (16921712-16922105) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| hyp (0.142837) |