Ss1.1-rhyp26c_g9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGCTTTCCTAATCTGTTCAACTATTCATTCATGAAGCGCGTCGTGAGGCCATTACTGGG GAAGGAATGACAGTGCCCTGGCCAGCAACATACCAGGGACCAGGACTGAGCGAGGACCGC ATTTGAGAAGCCGAAATGGCAAAAGCATTTAAAATTTGAGAACGCCTCCAAAGGAAAACA GCAAGTCTAGGGATTTGTGCTTCGTTTATAACCAAAGTTGGAAAAGTGAGACTTAAGCCC AGGTCAGTTTTCGCTTTATGGATATTAAGGAAAAAGGTGTTTAGTTTCCATAGCGGATTT AAGCATGTTGCTGGTGGGAAGAAGGCTGGTATTACAGTTTTCATGAGTTCTCAAAAGCTG TTCCCATTTATAAAAATGCACCGCTCTTACGCGCTCACCTTCTGCATCAAAATTGAAATT TCAGTATATTCGACCAAATCTGTACACAGAGCGATGGAACTTTTGGCACATCTAATTCCT CTGCTTATTCTGAAGTTTCTAGGATCTTGAAATAGATCTCCTGCCTGAGGGCCAATTCCT CTCTTGTTTTTCAGATGAGAACCTTTTCTGATCACCTTGACCTCTTTCCCCATTTAGTGG GTCTTCTCAGAAAGTACAGGTCTTTGTGCCTAATTTGGGTTGTTCCTGTTCCTTTTTCTT TCTTTCTTTTTTTTCTTTCTTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGCTTTCCTAATCTGTTCAACTATTCATTCATGAAGCGCGTCGTGAGGCCATTACTGGG GAAGGAATGACAGTGCCCTGGCCAGCAACATACCAGGGACCAGGACTGAGCGAGGACCGC ATTTGAGAAGCCGAAATGGCAAAAGCATTTAAAATTTGAGAACGCCTCCAAAGGAAAACA GCAAGTCTAGGGATTTGTGCTTCGTTTATAACCAAAGTTGGAAAAGTGAGACTTAAGCCC AGGTCAGTTTTCGCTTTATGGATATTAAGGAAAAAGGTGTTTAGTTTCCATAGCGGATTT AAGCATGTTGCTGGTGGGAAGAAGGCTGGTATTACAGTTTTCATGAGTTCTCAAAAGCTG TTCCCATTTATAAAAATGCACCGCTCTTACGCGCTCACCTTCTGCATCAAAATTGAAATT TCAGTATATTCGACCAAATCTGTACACAGAGCGATGGAACTTTTGGCACATCTAATTCCT CTGCTTATTCTGAAGTTTCTAGGATCTTGAAATAGATCTCCTGCCTGAGGGCCAATTCCT CTCTTGTTTTTCAGATGAGAACCTTTTCTGATCACCTTGACCTCTTTCCCCATTTAGTGG GTCTTCTCAGAAAGTACAGGTCTTTGTGCCTAATTTGGGTTGTTCCTGTTCCTTTTTCTT TCTTTCTTTTTTTTCTTTCTTTCT |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 192-661, gnl|bosTau2|chr2 (62148793-62149261) | |
| 192-661, gnl|canFam2|chr37 (19121156-19121884) | |
| 192-661, gnl|canFam2|chr37 (19121069-19121824) | |
| 192-661, gnl|echTel1|scaffold_301672 (20328-20980) | |
| 192-661, gnl|echTel1|scaffold_301672 (20243-20921) | |
| 192-661, gnl|hg17|chr19 (33176988-33177773) | |
| 192-661, gnl|hg17|chr2 (208454947-208455680) | |
| 192-661, gnl|Hg17|chr2 (208455464-208454976) | |
| 192-661, gnl|loxAfr1|scaffold_20174 (17112-17841) | |
| 192-661, gnl|loxAfr1|scaffold_20174 (17028-17785) | |
| 192-661, gnl|mm7|chr1 (64974410-64975078) | |
| 192-661, gnl|mm7|chr1 (64974316-64975018) | |
| 192-661, gnl|Mm7|chr1 (64974877-64974438) | |
| 192-661, gnl|oryCun1|scaffold_87638 (7652-8346) | |
| 192-661, gnl|oryCun1|scaffold_87638 (7562-8286) | |
| 192-661, gnl|panTro1|chr13 (98515499-98516239) | |
| 192-661, gnl|panTro1|chr20 (29353508-29354291) | |
| 192-661, gnl|rheMac2|chr12 (71666720-71667454) | |
| 192-661, gnl|rheMac2|chr12 (71666632-71667394) | |
| 192-661, gnl|rn3|chr9 (63531857-63532536) | |
| 192-661, gnl|rn3|chr9 (63531765-63532476) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 192-661, gnl|bosTau2|chr2 (62148793-62149261) | |
| 192-661, gnl|canFam2|chr37 (19121156-19121884) | |
| 192-661, gnl|canFam2|chr37 (19121069-19121824) | |
| 192-661, gnl|echTel1|scaffold_301672 (20328-20980) | |
| 192-661, gnl|echTel1|scaffold_301672 (20243-20921) | |
| 192-661, gnl|hg17|chr19 (33176988-33177773) | |
| 192-661, gnl|hg17|chr2 (208454947-208455680) | |
| 192-661, gnl|Hg17|chr2 (208455464-208454976) | |
| 192-661, gnl|loxAfr1|scaffold_20174 (17112-17841) | |
| 192-661, gnl|loxAfr1|scaffold_20174 (17028-17785) | |
| 192-661, gnl|mm7|chr1 (64974410-64975078) | |
| 192-661, gnl|mm7|chr1 (64974316-64975018) | |
| 192-661, gnl|Mm7|chr1 (64974877-64974438) | |
| 192-661, gnl|oryCun1|scaffold_87638 (7652-8346) | |
| 192-661, gnl|oryCun1|scaffold_87638 (7562-8286) | |
| 192-661, gnl|panTro1|chr13 (98515499-98516239) | |
| 192-661, gnl|panTro1|chr20 (29353508-29354291) | |
| 192-661, gnl|rheMac2|chr12 (71666720-71667454) | |
| 192-661, gnl|rheMac2|chr12 (71666632-71667394) | |
| 192-661, gnl|rn3|chr9 (63531857-63532536) | |
| 192-661, gnl|rn3|chr9 (63531765-63532476) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| pro (0.512033) | |
| sin (0.349895) | |
| ova (0.258264) | |
| fli (0.202881) | |
| cki (0.165235) | |
| nco (0.161734) | |
| hyp (0.142837) | |
| jej (0.0989218) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pro (0.512033) | |
| sin (0.349895) | |
| ova (0.258264) | |
| fli (0.202881) | |
| cki (0.165235) | |
| nco (0.161734) | |
| hyp (0.142837) | |
| jej (0.0989218) |