Non-Coding RNA Search

Ss1.1-rhyp26c_i8.5

Sequence:


               
               GTCTCTTCTTGTCAGCTCTTGTTTCTCGGAGATGGTCAAGAAGTACAGGCCTGTATCAGA
TACCATGTATATTTGCCATTACTGAGTTCTGGCATACTTGAGAGATCATTGTAAGTAGAG
TTACCTATTTAGCATAAGCTTATGATACAGAAGTGTTCCGCCTAAAAGATGTCTTTGGAA
TAAATATGATACTTGTAGAGCCTTATCATAGGGAAGCACATCACAAAGGAAATTACTTGA
TTGAAAATGTCATAGGGAAAGGGAAAGGATCAACAAGAGGCACATGGACCGAGTCCGTTA
TACAAAGTGGTAAGGATAAAGGCTATGTGAATGCATGAAGGAGAGACAGACATTTTGGAG
GAATATTCATCAGTATTTGGTGATAGACTAAACATAAAGTCACAAGAGGGAGATAGTTTA
AAGAAAATTCTGTCACTCAATCTAGAGGATAAGGAGAATGGCAAAACCCTAGGGAATAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTCTTCTTGTCAGCTCTTGTTTCTCGGAGATGGTCAAGAAGTACAGGCCTGTATCAGA
TACCATGTATATTTGCCATTACTGAGTTCTGGCATACTTGAGAGATCATTGTAAGTAGAG
TTACCTATTTAGCATAAGCTTATGATACAGAAGTGTTCCGCCTAAAAGATGTCTTTGGAA
TAAATATGATACTTGTAGAGCCTTATCATAGGGAAGCACATCACAAAGGAAATTACTTGA
TTGAAAATGTCATAGGGAAAGGGAAAGGATCAACAAGAGGCACATGGACCGAGTCCGTTA
TACAAAGTGGTAAGGATAAAGGCTATGTGAATGCATGAAGGAGAGACAGACATTTTGGAG
GAATATTCATCAGTATTTGGTGATAGACTAAACATAAAGTCACAAGAGGGAGATAGTTTA
AAGAAAATTCTGTCACTCAATCTAGAGGATAAGGAGAATGGCAAAACCCTAGGGAATAAA
AAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-485, gnl|bosTau2|chr28 (10273524-10273043)
               

               
               1-485, gnl|Hg17|chr10 (60681393-60681897)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-485, gnl|bosTau2|chr28 (10273524-10273043)
               

               
               1-485, gnl|Hg17|chr10 (60681393-60681897)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbe (0.717703)
               

               
               hyp (0.142837)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.717703)
               

               
               hyp (0.142837)

	1-485, gnl\|bosTau2\|chr28 (10273524-10273043)
	1-485, gnl\|Hg17\|chr10 (60681393-60681897)