Ss1.1-rhyp27c_p24.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGCAACCATGTCTGGGCGTGGCAAGGGCGGTAAAGGCCTGGGAAAAGGCGGCGCCAAG CGCCACCGCAAGGTTCTTCGCGACAACATTCAGGGCCACAAAACCTGCCATCCGGCGTTT GGCCCGGCGTGGCGGTGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGACCCGAGGGGT GCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCGAGCACGCCAA GCGCAAGACCGTCACCGCCATGGATGTGGTCTACGCGCTCAAGCGCCAGGGACGCACGCT CTATGGTTTTGGTGGCTGAGAGCACGTCATCTGTCTTATCTCTGCGTCACTTTTAATAAA GGCCCTTTTTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGCAACCATGTCTGGGCGTGGCAAGGGCGGTAAAGGCCTGGGAAAAGGCGGCGCCAAG CGCCACCGCAAGGTTCTTCGCGACAACATTCAGGGCCACAAAACCTGCCATCCGGCGTTT GGCCCGGCGTGGCGGTGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGACCCGAGGGGT GCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACCGAGCACGCCAA GCGCAAGACCGTCACCGCCATGGATGTGGTCTACGCGCTCAAGCGCCAGGGACGCACGCT CTATGGTTTTGGTGGCTGAGAGCACGTCATCTGTCTTATCTCTGCGTCACTTTTAATAAA GGCCCTTTTTAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 240-372, + strand, RNAz p=0.99797 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 240-372, + strand, RNAz p=0.99797 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of NM_021968, + |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 2-372, gnl|bosTau2|chr1 (41687860-41687491) | |
| 2-372, gnl|Hg17|chr6 (27899881-27900227) | |
| 2-372, gnl|Mm7|chr13 (22897101-22897458) | |
| 6-320, gnl|bosTau2|chr11 (65312647-65312331) | |
| 6-320, gnl|Hg17|chr6 (26129882-26130198) | |
| 6-320, gnl|Mm7|chr13 (22897096-22897416) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-372, gnl|bosTau2|chr1 (41687860-41687491) | |
| 2-372, gnl|Hg17|chr6 (27899881-27900227) | |
| 2-372, gnl|Mm7|chr13 (22897101-22897458) | |
| 6-320, gnl|bosTau2|chr11 (65312647-65312331) | |
| 6-320, gnl|Hg17|chr6 (26129882-26130198) | |
| 6-320, gnl|Mm7|chr13 (22897096-22897416) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| mas (0.210305) | |
| fbs (0.175346) | |
| hyp (0.142837) | |
| lnt (0.142308) | |
| med (0.116252) | |
| ecc (0.115035) | |
| nbm (0.0993246) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) | |
| fbs (0.175346) | |
| hyp (0.142837) | |
| lnt (0.142308) | |
| med (0.116252) | |
| ecc (0.115035) | |
| nbm (0.0993246) |