Non-Coding RNA Search

Ss1.1-rhyp28c_k6.5

Sequence:


               
               CATCTGGTCCTTCAATAGGTGGTTTTATTGCCAGGTTAATTGTTATTTTCCTTACTCCTT
ATCATCTCCTTTTCACTGACCTCATATATTGAAATAATGTAAATTAAATGTGTTTATGAT
GTAACCCCACTGTACGTCTTAGAGGCATTCATGTTTTGAGTGGTAAAAGATAAAAACATA
TATGCAGCCTATATGTATGTGCTGTATTTGGGCATTTCATCGAAAATGAATTAACAGCTA
GCCTATTTATGGTCATTAGCTTAATAAGCTTCTGTGTGGGAGAAAAATATTTAGATTCAA
AACTAATAACTAAATCATGGTTTTTGATTACGATCTAAATAAACAGGTTTAAAGCTTGCT
GCAAACTCTTAGATATTTGTGAATAGATGTGTTACTACATGCTGGAAACAAGCAAGAACT
AAATAATCAAGTGACATCAATCAGAAATGACTGAATAGTCAAGTATTGGAGATATTTTAA
AAATGTTTTTGTTATTAGCTGTTTTGAGTTAAATAAAATGAAAAACGTACTGGAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCTGGTCCTTCAATAGGTGGTTTTATTGCCAGGTTAATTGTTATTTTCCTTACTCCTT
ATCATCTCCTTTTCACTGACCTCATATATTGAAATAATGTAAATTAAATGTGTTTATGAT
GTAACCCCACTGTACGTCTTAGAGGCATTCATGTTTTGAGTGGTAAAAGATAAAAACATA
TATGCAGCCTATATGTATGTGCTGTATTTGGGCATTTCATCGAAAATGAATTAACAGCTA
GCCTATTTATGGTCATTAGCTTAATAAGCTTCTGTGTGGGAGAAAAATATTTAGATTCAA
AACTAATAACTAAATCATGGTTTTTGATTACGATCTAAATAAACAGGTTTAAAGCTTGCT
GCAAACTCTTAGATATTTGTGAATAGATGTGTTACTACATGCTGGAAACAAGCAAGAACT
AAATAATCAAGTGACATCAATCAGAAATGACTGAATAGTCAAGTATTGGAGATATTTTAA
AAATGTTTTTGTTATTAGCTGTTTTGAGTTAAATAAAATGAAAAACGTACTGGAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-526, gnl|bosTau2|chr16 (7506920-7506399)
               

               
               8-526, gnl|Hg17|chr5 (122372302-122372792)
               

               
               8-526, gnl|Mm7|chr18 (53771239-53771685)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-526, gnl|bosTau2|chr16 (7506920-7506399)
               

               
               8-526, gnl|Hg17|chr5 (122372302-122372792)
               

               
               8-526, gnl|Mm7|chr18 (53771239-53771685)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nmm (0.265604)
               

               
               hyp (0.142837)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.265604)
               

               
               hyp (0.142837)

	8-526, gnl\|bosTau2\|chr16 (7506920-7506399)
	8-526, gnl\|Hg17\|chr5 (122372302-122372792)
	8-526, gnl\|Mm7\|chr18 (53771239-53771685)