Ss1.1-rhyp28c_m5.5
|
GGCCTTGCTCACGGCGCCCGGCAGCCTCGCCCTAGCCAACCGCTCGGCCTTGGTTTCTTG
TTTGGTTGGTTTCTTCCCCATTTTTTCTGCCCTGGTCTCGCACTTTCTCCCCTCGGGACC
CTGGTATCTTGACTTCATTGCCAAAAACCAGCCCCCCAAGGGACCTCTCCTCCTCCTCCT
CTCCGTTTCTCTTCCTTCCCGCTTCCTCCTGGTTCTGGTCCGTTGCAAGGATTTAACAAT
CACAAGTGTCCTGCAAAAATGCCTGAACATTTTTCTTAGACCCTTGTGGAGTTTTTTTTT
TCCCCAAAAAAAACTTAGACACACAAAAGACTTATTTAACGGATCTGTACAGCCACCCCG
TGTTCAGGCGTTCTGTTTGAGAACATTTTAGCCATTGGTGTTCACACATGGCATCAGCCC
CTGCAAGATAGGTTTCTGTATTTGTATATTAAAATACAAAAAAAAAAAAAAAACCCTTAT
AAAATGTTTAAAAACATGTTCAAAGCCGGGGGGAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCCTTGCTCACGGCGCCCGGCAGCCTCGCCCTAGCCAACCGCTCGGCCTTGGTTTCTTG
TTTGGTTGGTTTCTTCCCCATTTTTTCTGCCCTGGTCTCGCACTTTCTCCCCTCGGGACC
CTGGTATCTTGACTTCATTGCCAAAAACCAGCCCCCCAAGGGACCTCTCCTCCTCCTCCT
CTCCGTTTCTCTTCCTTCCCGCTTCCTCCTGGTTCTGGTCCGTTGCAAGGATTTAACAAT
CACAAGTGTCCTGCAAAAATGCCTGAACATTTTTCTTAGACCCTTGTGGAGTTTTTTTTT
TCCCCAAAAAAAACTTAGACACACAAAAGACTTATTTAACGGATCTGTACAGCCACCCCG
TGTTCAGGCGTTCTGTTTGAGAACATTTTAGCCATTGGTGTTCACACATGGCATCAGCCC
CTGCAAGATAGGTTTCTGTATTTGTATATTAAAATACAAAAAAAAAAAAAAAACCCTTAT
AAAATGTTTAAAAACATGTTCAAAGCCGGGGGGAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
12-516, gnl|bosTau2|chr18 (1368116-1368612) |
|
12-516, gnl|canFam2|chr5 (78600125-78599505) |
|
12-516, gnl|dasNov1|scaffold_16934 (84384-84954) |
|
12-516, gnl|echTel1|scaffold_250313 (937-499) |
|
12-516, gnl|hg17|chr16 (73699459-73700034) |
|
12-516, gnl|Hg17|chr16 (73699576-73700052) |
|
12-516, gnl|loxAfr1|scaffold_36466 (18559-19143) |
|
12-516, gnl|mm7|chr8 (110223150-110223753) |
|
12-516, gnl|Mm7|chr8 (110223274-110223771) |
|
12-516, gnl|monDom2|scaffold_63 (10687183-10687715) |
|
12-516, gnl|oryCun1|scaffold_172761 (45398-44911) |
|
12-516, gnl|panTro1|chr18 (68092908-68093486) |
|
12-516, gnl|rheMac2|chr20 (73220614-73221188) |
|
12-516, gnl|rn3|chr19 (41544302-41544935) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
12-516, gnl|bosTau2|chr18 (1368116-1368612) |
|
12-516, gnl|canFam2|chr5 (78600125-78599505) |
|
12-516, gnl|dasNov1|scaffold_16934 (84384-84954) |
|
12-516, gnl|echTel1|scaffold_250313 (937-499) |
|
12-516, gnl|hg17|chr16 (73699459-73700034) |
|
12-516, gnl|Hg17|chr16 (73699576-73700052) |
|
12-516, gnl|loxAfr1|scaffold_36466 (18559-19143) |
|
12-516, gnl|mm7|chr8 (110223150-110223753) |
|
12-516, gnl|Mm7|chr8 (110223274-110223771) |
|
12-516, gnl|monDom2|scaffold_63 (10687183-10687715) |
|
12-516, gnl|oryCun1|scaffold_172761 (45398-44911) |
|
12-516, gnl|panTro1|chr18 (68092908-68093486) |
|
12-516, gnl|rheMac2|chr20 (73220614-73221188) |
|
12-516, gnl|rn3|chr19 (41544302-41544935) |
|
ece (0.229305) |
|
fty (0.17584) |
|
fhi (0.169578) |
|
hyp (0.142837) |
|
thg (0.126791) |
|
ece (0.229305) |
|
fty (0.17584) |
|
fhi (0.169578) |
|
hyp (0.142837) |
|
thg (0.126791) |
