Non-Coding RNA Search

Ss1.1-rhyp29c_b19.5

Sequence:


               
               ACACGTACTCCAATGTTCATTGCAGCACTATTTACAATAGCCAAAACATGAAAACAACCT
AAATGTCCATCAACAGAGGAGTGGATCAAGAAGTGGTACATATACACAATGGAATATTAC
TCAGCCGTTAAAAGGAACGAAATACTGGCATTTTTAGCAACATGGATGGATCTAGAAATT
ATCATGCTAAGTGAAGTCAGCCATACAATGAGACACCAACATAAAATGCTTTCACTGACA
TGTGGAATCTGAAAAAAGGACAGACTGAACTTCTTTGCAGAACAGATGCTGACTCACAGA
CACTGAAAAACTTATGGTCTCTGGAGGAGACAGTTTGGGGGGTGGAGGGATGTGCTTGGG
TTATGGGATGGAAATCCTGTGAAATTGGATTGTTATGATCATTATACAACTACAGATGTG
ATAAATTCACTTGAGTAATAAAAAAAAGAATAATACCAATTTAAAAAAAAATGCAAGACT
CCTAGGACTTTTAGCTGGACTATTATTCCAGTATTTAAGTAGTTCTTTTGGTAGAGCCAA
ACTAAACATCTTAAACCAGTGATGACAATCTAAGGTCTTTGCTCATGTTTCTAGGAAATG
TCGTAGTATGGCCATTTCTGCAATCTTGATCAGAAAAAATTTAGGAAGAATTTGATCCAC
CTGATTGACAGGTGTCCTCCACTGAAACTGTTGCCAAGACCCAAGTAGAATCCTGAAGTT
CTATCATTGTTGAAATCCCCACCAAGCCATGTTGTTTAAGCGTAGAAAGTAGTTATCTTA
TTGTGTAGGTTTGTACTCCTCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACGTACTCCAATGTTCATTGCAGCACTATTTACAATAGCCAAAACATGAAAACAACCT
AAATGTCCATCAACAGAGGAGTGGATCAAGAAGTGGTACATATACACAATGGAATATTAC
TCAGCCGTTAAAAGGAACGAAATACTGGCATTTTTAGCAACATGGATGGATCTAGAAATT
ATCATGCTAAGTGAAGTCAGCCATACAATGAGACACCAACATAAAATGCTTTCACTGACA
TGTGGAATCTGAAAAAAGGACAGACTGAACTTCTTTGCAGAACAGATGCTGACTCACAGA
CACTGAAAAACTTATGGTCTCTGGAGGAGACAGTTTGGGGGGTGGAGGGATGTGCTTGGG
TTATGGGATGGAAATCCTGTGAAATTGGATTGTTATGATCATTATACAACTACAGATGTG
ATAAATTCACTTGAGTAATAAAAAAAAGAATAATACCAATTTAAAAAAAAATGCAAGACT
CCTAGGACTTTTAGCTGGACTATTATTCCAGTATTTAAGTAGTTCTTTTGGTAGAGCCAA
ACTAAACATCTTAAACCAGTGATGACAATCTAAGGTCTTTGCTCATGTTTCTAGGAAATG
TCGTAGTATGGCCATTTCTGCAATCTTGATCAGAAAAAATTTAGGAAGAATTTGATCCAC
CTGATTGACAGGTGTCCTCCACTGAAACTGTTGCCAAGACCCAAGTAGAATCCTGAAGTT
CTATCATTGTTGAAATCCCCACCAAGCCATGTTGTTTAAGCGTAGAAAGTAGTTATCTTA
TTGTGTAGGTTTGTACTCCTCATG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|56492562|emb|CAI01941.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56492562|emb|CAI01941.1|

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-369, gnl|bosTau2|chr10 (16598299-16598663)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-369, gnl|bosTau2|chr10 (16598299-16598663)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)