Ss1.1-rhyp32c_g1.5
|
TGTGGCGTGGGGCGGGTGTGGGGGTGGGGGGAGTGGGTGTGTTTCGACCAAGGGTGCATT
CCTAAAGATCTCTGGTGCTGAAGGGCCTCCGGTTCCTTTCAGAGACTGCATTCGACACAC
TTGAAGTACACACGAATGGTATCACATGCAATATTTTAATGGAGCAATGGGAGAGGCTCT
TAGAAATGGGGTTTGGCATCTTTTTGTAACATTTTGATTTCTCTGGTGCCTTATTCCTAC
TGGACGCTGGCACTCACATCCCCACGGGGAGCTGACTCCCAAGTTGGCCTCGGAAGTGGG
GACGCCTGAGCAAGCGGGGCGTGAGGAGGGTAGTGTCCGTTGGTGGAGAGGGGACTAGGT
GGTATCTCTTAGCCGAAGCCAAGCAGAGACTGCACAAATCCACACAAAGTTAACACCTGC
AACCTGGAACACACCCTAAACTCATGCTTCCTCATCCGAGCTTTCCTTCCTTCTTCCTCT
TCTATCTCTGCCTTCTCGTCAAGGTGCTGCTGCTGCTGCTGCTAAGGTGCCCGGAGTCCA
GAACACCCAGTAATCACTCAGGCACGAGCCTGGCACTGCCACGTCAGCCCCTGGCACGAC
CAAACCCGGGTTTCTTTTGCTGGGGGCTGCGAACCGTCAGATTTTTCTCATCAAAAATGT
TTTCCAAGGAATCAGTGGATGACAGTTATTCTGCATTGAAAATGCACTTTAAAAAAATAA
ATAAAAGCTCCAGACTGTTTAAAATGTACAGAGGGAGCAGGGGAAAGATAAACACGTGCT
AGTGTCTGAACCCAGTTCAGTTTATCTCCAGTTGAAACAATATACACTATATTATGTATA
AATGTATACACACTTCCTATATATATCCATATATATATAGTGTATATATTATACATGTAT
AGGTGTGTATATGTGCATATACACACACATGCACATAACAAATCCAGATGCTCATTACAA
AACCAGATGCTACAGGAACAGCAGCAGAGGAAACAAGGTTGGACTCTTGCAACAGATCAC
AAAAAATAAAAACAGCCACTTGCAGTGACTTTGGTCATTTCTGTATGTTCACAAGGAATG
GATTGTAACAAAGAAAAAAGGAACAGTGTTAGTGAAAGAGGAAAAAATGGGCGAAACCAT
CTTGATCCAATGGGAATGCAGTAATGTTCTATACCATTTCACCCACTTATTTTAGTCATG
TTGATTTGATTTCAGTTTTTGGCTAGCAATTTCTTTTAAACTCAAGTGACCCACAACAAA
CAACAAAACAACTACAGTGAAAGCCCTTTTCAGTGGAAGATGTCAGAAATCTCAAAACCC
TTGGCCTGACTCAGAACTACCATGTGCAAATCAGTACTCTCAATGTTTGAAATAAAACTG
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGTGGCGTGGGGCGGGTGTGGGGGTGGGGGGAGTGGGTGTGTTTCGACCAAGGGTGCATT
CCTAAAGATCTCTGGTGCTGAAGGGCCTCCGGTTCCTTTCAGAGACTGCATTCGACACAC
TTGAAGTACACACGAATGGTATCACATGCAATATTTTAATGGAGCAATGGGAGAGGCTCT
TAGAAATGGGGTTTGGCATCTTTTTGTAACATTTTGATTTCTCTGGTGCCTTATTCCTAC
TGGACGCTGGCACTCACATCCCCACGGGGAGCTGACTCCCAAGTTGGCCTCGGAAGTGGG
GACGCCTGAGCAAGCGGGGCGTGAGGAGGGTAGTGTCCGTTGGTGGAGAGGGGACTAGGT
GGTATCTCTTAGCCGAAGCCAAGCAGAGACTGCACAAATCCACACAAAGTTAACACCTGC
AACCTGGAACACACCCTAAACTCATGCTTCCTCATCCGAGCTTTCCTTCCTTCTTCCTCT
TCTATCTCTGCCTTCTCGTCAAGGTGCTGCTGCTGCTGCTGCTAAGGTGCCCGGAGTCCA
GAACACCCAGTAATCACTCAGGCACGAGCCTGGCACTGCCACGTCAGCCCCTGGCACGAC
CAAACCCGGGTTTCTTTTGCTGGGGGCTGCGAACCGTCAGATTTTTCTCATCAAAAATGT
TTTCCAAGGAATCAGTGGATGACAGTTATTCTGCATTGAAAATGCACTTTAAAAAAATAA
ATAAAAGCTCCAGACTGTTTAAAATGTACAGAGGGAGCAGGGGAAAGATAAACACGTGCT
AGTGTCTGAACCCAGTTCAGTTTATCTCCAGTTGAAACAATATACACTATATTATGTATA
AATGTATACACACTTCCTATATATATCCATATATATATAGTGTATATATTATACATGTAT
AGGTGTGTATATGTGCATATACACACACATGCACATAACAAATCCAGATGCTCATTACAA
AACCAGATGCTACAGGAACAGCAGCAGAGGAAACAAGGTTGGACTCTTGCAACAGATCAC
AAAAAATAAAAACAGCCACTTGCAGTGACTTTGGTCATTTCTGTATGTTCACAAGGAATG
GATTGTAACAAAGAAAAAAGGAACAGTGTTAGTGAAAGAGGAAAAAATGGGCGAAACCAT
CTTGATCCAATGGGAATGCAGTAATGTTCTATACCATTTCACCCACTTATTTTAGTCATG
TTGATTTGATTTCAGTTTTTGGCTAGCAATTTCTTTTAAACTCAAGTGACCCACAACAAA
CAACAAAACAACTACAGTGAAAGCCCTTTTCAGTGGAAGATGTCAGAAATCTCAAAACCC
TTGGCCTGACTCAGAACTACCATGTGCAAATCAGTACTCTCAATGTTTGAAATAAAACTG
AAAAAAAAAAAA
|
|
820-913, MI0003574 (hsa-mir-568), blast E-value=2.00386e-43 |
PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)
|
820-913, MI0003574 (hsa-mir-568), blast E-value=2.00386e-43 |
|
kid (0.518941) |
|
mga (0.480615) |
|
ova (0.258264) |
|
nep (0.183925) |
|
gul (0.177588) |
|
lun (0.150489) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
ski (0.146735) |
|
liv (0.146284) |
|
hyp (0.142837) |
|
che (0.136314) |
|
ssp (0.13552) |
|
lyg (0.133103) |
|
ret (0.128733) |
|
thg (0.126791) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
spc (0.113366) |
|
kid (0.518941) |
|
mga (0.480615) |
|
ova (0.258264) |
|
nep (0.183925) |
|
gul (0.177588) |
|
lun (0.150489) |
|
isp (0.150376) |
|
bfe (0.149858) |
|
ski (0.146735) |
|
liv (0.146284) |
|
hyp (0.142837) |
|
che (0.136314) |
|
ssp (0.13552) |
|
lyg (0.133103) |
|
ret (0.128733) |
|
thg (0.126791) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
spc (0.113366) |
