Ss1.1-rill308b_d18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTGTTGTTGACTGAGGTTTATTCAAAATATTACAGCATAGCAGAAAGACTCAAAC GGCTCCACGTGGTGTTTTGAAATTCATCCCAACTGTAGGCTGAGTGACTTGCAGGTTGGA CAGACTGCCAAAGTCCAAGAGTTCTGGAGCGCCGGGGCGCCCACTTCTACCTGGCGGGCA ACGCCAAGTACATGCCGGCCGGCGTGTCGGACGCCCTGACCTCCATCTTCCAGGAGGAGG GTGGGCTCTCCAGCCCCGAGGCGGCCGCCTACCTTGCCAGGCTCCAGCGGACGCTGCGTT TCCAGACTGAGACGTGGGCCTGAGGCGCCGTCGTGCTGGTGGCCGCAGCCACTCTGACCA CTGTCCTCCGGGGGCCGTTGCTACCTCCCGCCCTCATGCCAGCGGGAGGACAGGCAGCTC TCCGGCAGCCCGCCCGCCCGCACTCCAGCTGACTCCCATCCCACCCGCGCCCCGGCCCTG CGGCCCACCCCCACCACGAGGGCTGCAGGCTCCTGCTGGCCCCGCTCGGGTCCCGGTCAG GCTGGGGCCTGGGCTGCACACACCTTCCTGGCCTGGCTCCAGGAAAGTCTCAGCAATAAA TGATGTGCTCTGAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTGTTGTTGACTGAGGTTTATTCAAAATATTACAGCATAGCAGAAAGACTCAAAC GGCTCCACGTGGTGTTTTGAAATTCATCCCAACTGTAGGCTGAGTGACTTGCAGGTTGGA CAGACTGCCAAAGTCCAAGAGTTCTGGAGCGCCGGGGCGCCCACTTCTACCTGGCGGGCA ACGCCAAGTACATGCCGGCCGGCGTGTCGGACGCCCTGACCTCCATCTTCCAGGAGGAGG GTGGGCTCTCCAGCCCCGAGGCGGCCGCCTACCTTGCCAGGCTCCAGCGGACGCTGCGTT TCCAGACTGAGACGTGGGCCTGAGGCGCCGTCGTGCTGGTGGCCGCAGCCACTCTGACCA CTGTCCTCCGGGGGCCGTTGCTACCTCCCGCCCTCATGCCAGCGGGAGGACAGGCAGCTC TCCGGCAGCCCGCCCGCCCGCACTCCAGCTGACTCCCATCCCACCCGCGCCCCGGCCCTG CGGCCCACCCCCACCACGAGGGCTGCAGGCTCCTGCTGGCCCCGCTCGGGTCCCGGTCAG GCTGGGGCCTGGGCTGCACACACCTTCCTGGCCTGGCTCCAGGAAAGTCTCAGCAATAAA TGATGTGCTCTGAAAAAAAAAAAA |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 8-136, gnl|bosTau2|chr21 (13208728-13208856) | |
| 8-136, gnl|canFam2|chr1 (96118061-96117970) | |
| 8-136, gnl|dasNov1|scaffold_162314 (4804-4893) | |
| 8-136, gnl|echTel1|scaffold_308697 (88854-88764) | |
| 8-136, gnl|hg17|chr12 (91180447-91180538) | |
| 8-136, gnl|Hg17|chr15 (81002559-81002688) | |
| 8-136, gnl|loxAfr1|scaffold_20338 (42936-42845) | |
| 8-136, gnl|mm7|chr10 (96051619-96051530) | |
| 8-136, gnl|Mm7|chr7 (77215439-77215557) | |
| 8-136, gnl|oryCun1|scaffold_209960 (351466-351556) | |
| 8-136, gnl|panTro1|chr10 (93358286-93358377) | |
| 8-136, gnl|rheMac2|chr11 (93498791-93498882) | |
| 8-136, gnl|rn3|chr7 (33899129-33899041) | |
| 178-427, gnl|bosTau2|chr11 (85468743-85468489) | |
| 178-427, gnl|canFam2|chr6 (10316946-10317124) | |
| 178-427, gnl|danRer3|chr10 (32653177-32653348) | |
| 178-427, gnl|dasNov1|scaffold_70938 (9623-9803) | |
| 178-427, gnl|fr1|chrUn (14756712-14756858) | |
| 178-427, gnl|galGal2|chr19 (4039177-4038988) | |
| 178-427, gnl|hg17|chr7 (75260304-75260476) | |
| 178-427, gnl|loxAfr1|scaffold_18542 (24179-23992) | |
| 178-427, gnl|mm7|chr5 (134706091-134706259) | |
| 178-427, gnl|panTro1|chr6 (76355297-76355476) | |
| 178-427, gnl|rheMac2|chr3 (50288055-50287883) | |
| 178-427, gnl|rn3|chr12 (22066402-22066233) | |
| 178-427, gnl|tetNig1|chrUn_random (14628290-14628444) | |
| 178-427, gnl|xenTro1|scaffold_38 (805413-805576) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 8-136, gnl|bosTau2|chr21 (13208728-13208856) | |
| 8-136, gnl|canFam2|chr1 (96118061-96117970) | |
| 8-136, gnl|dasNov1|scaffold_162314 (4804-4893) | |
| 8-136, gnl|echTel1|scaffold_308697 (88854-88764) | |
| 8-136, gnl|hg17|chr12 (91180447-91180538) | |
| 8-136, gnl|Hg17|chr15 (81002559-81002688) | |
| 8-136, gnl|loxAfr1|scaffold_20338 (42936-42845) | |
| 8-136, gnl|mm7|chr10 (96051619-96051530) | |
| 8-136, gnl|Mm7|chr7 (77215439-77215557) | |
| 8-136, gnl|oryCun1|scaffold_209960 (351466-351556) | |
| 8-136, gnl|panTro1|chr10 (93358286-93358377) | |
| 8-136, gnl|rheMac2|chr11 (93498791-93498882) | |
| 8-136, gnl|rn3|chr7 (33899129-33899041) | |
| 178-427, gnl|bosTau2|chr11 (85468743-85468489) | |
| 178-427, gnl|canFam2|chr6 (10316946-10317124) | |
| 178-427, gnl|danRer3|chr10 (32653177-32653348) | |
| 178-427, gnl|dasNov1|scaffold_70938 (9623-9803) | |
| 178-427, gnl|fr1|chrUn (14756712-14756858) | |
| 178-427, gnl|galGal2|chr19 (4039177-4038988) | |
| 178-427, gnl|hg17|chr7 (75260304-75260476) | |
| 178-427, gnl|loxAfr1|scaffold_18542 (24179-23992) | |
| 178-427, gnl|mm7|chr5 (134706091-134706259) | |
| 178-427, gnl|panTro1|chr6 (76355297-76355476) | |
| 178-427, gnl|rheMac2|chr3 (50288055-50287883) | |
| 178-427, gnl|rn3|chr12 (22066402-22066233) | |
| 178-427, gnl|tetNig1|chrUn_random (14628290-14628444) | |
| 178-427, gnl|xenTro1|scaffold_38 (805413-805576) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| fhi (0.169578) |