Ss1.1-rill311b_f17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATGCCTGTTTGGCTCCCCAGCCAGGACGAGCCCCTTCCCAGCAGCAACTGTGCCATCCG AGCTGGGGACAAAGATGCCGGTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCCCT GGGGCTCAACGAGCGGCTGGGGGGTGGCAACCCACAGGAAGTGCATGAGCTGACCCCACA CCCCGAGCAGGTGGGGCCCACCGTGAGCTCTGCTGAGGGGCTGGACCTGGTGAGCACCAA GGACCTGGCGGGCCAGCTGACGGATCACGACTGGAGCCTCTTCAACAGCATCCACCAGGT GGAACTGATCCACTACGTGCTGGGGCCCCAGCATCTGCGGGACGTCACCACCGCCAACCT GGAGCGTTTCATGCGCCGCTTCAACGAGTTGCAGTACTGGGTGGCCACGGAGCTGTGTCT CTGCTCTGTGCCCAGCCTGCGGGCCCAGCTGCTCAGGAAGTTCATCAAACTGGCAGCCCA CCTCAAGGAGCAGAAGAATCTCAATTCCTTCTTTGCTGTCATGTTTGGCCTCAGCAACTC GGCCATCAGCCGCCTGGCCCATACCTGGGAGCGGCTGCCCCACAAAGTCCGGAAGCTGTA CTCAGCCCTCGAGAGGCTGCTGGACCCCTCATGGAACCACCGAGTGTACCGTGTAGCCCT CACCAAGCTGTCCCCTCCTGTCATCCCCTTCATGCCCCTTCTTCTCAAAGACATGACCTT CATCCATGAGGGAAACCACACCCTGGTGGAGAATCTCATCAACTTTGAGAAGATGAGAAT GATGGCCAGAGCCGTGCGGATGCTGCACCACTGCCGAAGCCACAGCAATGTGCCCCTGTC ACCACTGAGAAGCCGAGTCTCCCACCTGCACGAGGACAGCCAGGCGGCCAGGATTTCCAC GTGCTCGGAACAGTCCCTGAGCACCCGGAGTCCGGCCGGCACCTGGGCTTCTCTCCAGCA GCTGAAGGTCATTGACAACCAGCGGGAGCTGTCTCGCCTGTCCCGGGAGCTGGAGCCTTG AGGAGTGGTTAGGCTGGAGCGGGCACTTGCCACCAGGAGAGCCAGGGCGTGCCGGGCCTG GAGGCCCACAGGCTGGCCGAGCCGGGCAGGGCTCTCCACGGACTGGACTCGAGGCCCTGG AGCAGGCGACGCGGAGGCTGCTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATGCCTGTTTGGCTCCCCAGCCAGGACGAGCCCCTTCCCAGCAGCAACTGTGCCATCCG AGCTGGGGACAAAGATGCCGGTGGCCTGCAGCCAGATGCCCGTGGTGTGGCCACATCCCT GGGGCTCAACGAGCGGCTGGGGGGTGGCAACCCACAGGAAGTGCATGAGCTGACCCCACA CCCCGAGCAGGTGGGGCCCACCGTGAGCTCTGCTGAGGGGCTGGACCTGGTGAGCACCAA GGACCTGGCGGGCCAGCTGACGGATCACGACTGGAGCCTCTTCAACAGCATCCACCAGGT GGAACTGATCCACTACGTGCTGGGGCCCCAGCATCTGCGGGACGTCACCACCGCCAACCT GGAGCGTTTCATGCGCCGCTTCAACGAGTTGCAGTACTGGGTGGCCACGGAGCTGTGTCT CTGCTCTGTGCCCAGCCTGCGGGCCCAGCTGCTCAGGAAGTTCATCAAACTGGCAGCCCA CCTCAAGGAGCAGAAGAATCTCAATTCCTTCTTTGCTGTCATGTTTGGCCTCAGCAACTC GGCCATCAGCCGCCTGGCCCATACCTGGGAGCGGCTGCCCCACAAAGTCCGGAAGCTGTA CTCAGCCCTCGAGAGGCTGCTGGACCCCTCATGGAACCACCGAGTGTACCGTGTAGCCCT CACCAAGCTGTCCCCTCCTGTCATCCCCTTCATGCCCCTTCTTCTCAAAGACATGACCTT CATCCATGAGGGAAACCACACCCTGGTGGAGAATCTCATCAACTTTGAGAAGATGAGAAT GATGGCCAGAGCCGTGCGGATGCTGCACCACTGCCGAAGCCACAGCAATGTGCCCCTGTC ACCACTGAGAAGCCGAGTCTCCCACCTGCACGAGGACAGCCAGGCGGCCAGGATTTCCAC GTGCTCGGAACAGTCCCTGAGCACCCGGAGTCCGGCCGGCACCTGGGCTTCTCTCCAGCA GCTGAAGGTCATTGACAACCAGCGGGAGCTGTCTCGCCTGTCCCGGGAGCTGGAGCCTTG AGGAGTGGTTAGGCTGGAGCGGGCACTTGCCACCAGGAGAGCCAGGGCGTGCCGGGCCTG GAGGCCCACAGGCTGGCCGAGCCGGGCAGGGCTCTCCACGGACTGGACTCGAGGCCCTGG AGCAGGCGACGCGGAGGCTGCTGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 295-480, gnl|bosTau2|chr5 (24680105-24679920) | |
| 295-480, gnl|canFam2|chr27 (10022243-10022108) | |
| 295-480, gnl|danRer3|chrNA (389761-389896) | |
| 295-480, gnl|dasNov1|scaffold_5157 (87157-87014) | |
| 295-480, gnl|echTel1|scaffold_314918 (53509-53374) | |
| 295-480, gnl|fr1|chrUn (264276088-264276220) | |
| 295-480, gnl|galGal2|chrUn (6526150-6526015) | |
| 295-480, gnl|hg17|chr12 (46420689-46420824) | |
| 295-480, gnl|Hg17|chr12 (46420877-46420692) | |
| 295-480, gnl|loxAfr1|scaffold_598 (54898-55033) | |
| 295-480, gnl|mm7|chr15 (97750578-97750713) | |
| 295-480, gnl|Mm7|chr15 (97750766-97750581) | |
| 295-480, gnl|oryCun1|scaffold_140423 (1163-1298) | |
| 295-480, gnl|panTro1|chr10 (47404919-47405054) | |
| 295-480, gnl|rheMac2|chr11 (44809295-44809430) | |
| 295-480, gnl|rn3|chr7 (136534104-136534239) | |
| 295-480, gnl|tetNig1|chr9 (8653497-8653362) | |
| 295-480, gnl|xenTro1|scaffold_136 (789911-789776) | |
| 903-1164, gnl|bosTau2|chr5 (24676374-24676112) | |
| 903-1164, gnl|Hg17|chr12 (46417735-46417466) | |
| 903-1164, gnl|Mm7|chr15 (97746241-97745981) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 295-480, gnl|bosTau2|chr5 (24680105-24679920) | |
| 295-480, gnl|canFam2|chr27 (10022243-10022108) | |
| 295-480, gnl|danRer3|chrNA (389761-389896) | |
| 295-480, gnl|dasNov1|scaffold_5157 (87157-87014) | |
| 295-480, gnl|echTel1|scaffold_314918 (53509-53374) | |
| 295-480, gnl|fr1|chrUn (264276088-264276220) | |
| 295-480, gnl|galGal2|chrUn (6526150-6526015) | |
| 295-480, gnl|hg17|chr12 (46420689-46420824) | |
| 295-480, gnl|Hg17|chr12 (46420877-46420692) | |
| 295-480, gnl|loxAfr1|scaffold_598 (54898-55033) | |
| 295-480, gnl|mm7|chr15 (97750578-97750713) | |
| 295-480, gnl|Mm7|chr15 (97750766-97750581) | |
| 295-480, gnl|oryCun1|scaffold_140423 (1163-1298) | |
| 295-480, gnl|panTro1|chr10 (47404919-47405054) | |
| 295-480, gnl|rheMac2|chr11 (44809295-44809430) | |
| 295-480, gnl|rn3|chr7 (136534104-136534239) | |
| 295-480, gnl|tetNig1|chr9 (8653497-8653362) | |
| 295-480, gnl|xenTro1|scaffold_136 (789911-789776) | |
| 903-1164, gnl|bosTau2|chr5 (24676374-24676112) | |
| 903-1164, gnl|Hg17|chr12 (46417735-46417466) | |
| 903-1164, gnl|Mm7|chr15 (97746241-97745981) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| hyp (0.142837) |