Ss1.1-rill312b_p18.5
|
TTTAAGAAAGCAGAAGCACCGTCATTTGCACAGTCCTCATAGATCACAACACCTTAACTC
TGACTCTTTACTCCAGTTTTTCAAAAGAAGTGAAGTCAAGATGAAGAACTCTTTGCTCTT
CTGGGGAGTCCTGGTCATTTTTGTTGAGGCTGTTTTTGTGACAGCCCAAGATGAAGAAGA
AAGTACCGTCCTTGTTGATAACAAATGTAAGTGTGCCCGGATTACTTCCAGGATCATCCG
CTCTGCTGAAGACCCTAGTCAAGACATTGTGGAGAGAAACATCAGAATTATTGTTCCTCT
GAACAACAGGGAGAATATCTCTGATCCCACCTCACCACTGAGAACCAATTTTGTGTACCA
TTTGTCTGACCTCTGTAAGAAATGTGATCTTACAGAAGTGGAGCTGGATAATCAAATCGT
TACTGCCACCCAGAGCAATTTATGTGATGACGACATTGAGACCTGCTATGCTTATGACAG
AAACAAGTGCTACACAAACACGGTCCCATTTACCTATGATGGACAGACCAAAATGGTGCA
AACAGCCTTGACCCCGGATTCCTGCTATCCTGACTAATTTAATCCTTACAGGCTGCACAA
CTCCTTATCTTGAAAGGCTCTCCATTTCCATTCAGGTAGTTAATCAGTTTACTACCAATG
AATTTGAAACTATGATTTTTTTTTTTTTAGGGGGATAATGTAAAACTCATTCCTTCTCTC
TGCCCAATGATTGAAATAATAACATTGTTATTTTAAAGGTAAATTACTACATTTAAAAAA
ACAGGCAAAGGGAGAAAATAAAACTCAGAGTAATTTTTCCTTCCTTTTTTTTTTTTGGCT
TTGCCCTGGAGAGCCTGAGCTTTTGCATATTCCATATTAATCTCTTTTAAAAAGTATCAC
TGTGTAGAGAAAATTTATATGTAAATATAAGTCAATGTATTTGTCTTCATTAGAAGAAGA
ATAATTGGAAAACATGTTTTAGAAAGATTCATAAAATTATTTAAAATGGGATCTCTAATA
TTTATGAAACCAATTATCCAAAAGTGACATAATTAAATGTATATTTGAAGGATATATTTT
GCCATAACATATTTCGGAGAAAATGATACAGATTTTTTTAAAACAATTTTTATTTGATAA
TCAGGATAGTGTAAGAAATCCCCATTGGAAATCATCTCTGTTGTAACTTACTCTAACAAA
TTATGTATACCAAAATATGTGTTCTCTAGCACAGTTTGAACAATTAAATAGATTCATGAG
CATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATACTTGTGTTAACATTGCTGTATG
TAAGTTGAAATA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTAAGAAAGCAGAAGCACCGTCATTTGCACAGTCCTCATAGATCACAACACCTTAACTC
TGACTCTTTACTCCAGTTTTTCAAAAGAAGTGAAGTCAAGATGAAGAACTCTTTGCTCTT
CTGGGGAGTCCTGGTCATTTTTGTTGAGGCTGTTTTTGTGACAGCCCAAGATGAAGAAGA
AAGTACCGTCCTTGTTGATAACAAATGTAAGTGTGCCCGGATTACTTCCAGGATCATCCG
CTCTGCTGAAGACCCTAGTCAAGACATTGTGGAGAGAAACATCAGAATTATTGTTCCTCT
GAACAACAGGGAGAATATCTCTGATCCCACCTCACCACTGAGAACCAATTTTGTGTACCA
TTTGTCTGACCTCTGTAAGAAATGTGATCTTACAGAAGTGGAGCTGGATAATCAAATCGT
TACTGCCACCCAGAGCAATTTATGTGATGACGACATTGAGACCTGCTATGCTTATGACAG
AAACAAGTGCTACACAAACACGGTCCCATTTACCTATGATGGACAGACCAAAATGGTGCA
AACAGCCTTGACCCCGGATTCCTGCTATCCTGACTAATTTAATCCTTACAGGCTGCACAA
CTCCTTATCTTGAAAGGCTCTCCATTTCCATTCAGGTAGTTAATCAGTTTACTACCAATG
AATTTGAAACTATGATTTTTTTTTTTTTAGGGGGATAATGTAAAACTCATTCCTTCTCTC
TGCCCAATGATTGAAATAATAACATTGTTATTTTAAAGGTAAATTACTACATTTAAAAAA
ACAGGCAAAGGGAGAAAATAAAACTCAGAGTAATTTTTCCTTCCTTTTTTTTTTTTGGCT
TTGCCCTGGAGAGCCTGAGCTTTTGCATATTCCATATTAATCTCTTTTAAAAAGTATCAC
TGTGTAGAGAAAATTTATATGTAAATATAAGTCAATGTATTTGTCTTCATTAGAAGAAGA
ATAATTGGAAAACATGTTTTAGAAAGATTCATAAAATTATTTAAAATGGGATCTCTAATA
TTTATGAAACCAATTATCCAAAAGTGACATAATTAAATGTATATTTGAAGGATATATTTT
GCCATAACATATTTCGGAGAAAATGATACAGATTTTTTTAAAACAATTTTTATTTGATAA
TCAGGATAGTGTAAGAAATCCCCATTGGAAATCATCTCTGTTGTAACTTACTCTAACAAA
TTATGTATACCAAAATATGTGTTCTCTAGCACAGTTTGAACAATTAAATAGATTCATGAG
CATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATACTTGTGTTAACATTGCTGTATG
TAAGTTGAAATA
|
|
gi|57095596|ref|XP_532398.1| |
Protein identifier
|
gi|57095596|ref|XP_532398.1| |
|
1-164, gnl|bosTau2|chr6 (48323573-48323410) |
|
1-164, gnl|canFam2|chr13 (62909509-62909966) |
|
1-164, gnl|dasNov1|scaffold_153441 (4748-4261) |
|
1-164, gnl|echTel1|scaffold_299441 (9498-9951) |
|
1-164, gnl|hg17|chr4 (71896858-71897310) |
|
1-164, gnl|Hg17|chr4 (71897343-71897179) |
|
1-164, gnl|loxAfr1|scaffold_3661 (65694-65238) |
|
1-164, gnl|mm7|chr5 (88467843-88468300) |
|
1-164, gnl|Mm7|chr5 (88468333-88468175) |
|
1-164, gnl|monDom2|scaffold_32 (16101699-16102150) |
|
1-164, gnl|oryCun1|scaffold_174112 (4969-4525) |
|
1-164, gnl|panTro1|chr3 (61846890-61846438) |
|
1-164, gnl|rheMac2|chr5 (58976011-58975573) |
|
1-164, gnl|rn3|chr14 (21119604-21119138) |
| |
|
360-1332, gnl|bosTau2|chr6 (48315506-48314521) |
|
360-1332, gnl|Hg17|chr4 (71887304-71886230) |
|
360-1332, gnl|Mm7|chr5 (88461995-88460989) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-164, gnl|bosTau2|chr6 (48323573-48323410) |
|
1-164, gnl|canFam2|chr13 (62909509-62909966) |
|
1-164, gnl|dasNov1|scaffold_153441 (4748-4261) |
|
1-164, gnl|echTel1|scaffold_299441 (9498-9951) |
|
1-164, gnl|hg17|chr4 (71896858-71897310) |
|
1-164, gnl|Hg17|chr4 (71897343-71897179) |
|
1-164, gnl|loxAfr1|scaffold_3661 (65694-65238) |
|
1-164, gnl|mm7|chr5 (88467843-88468300) |
|
1-164, gnl|Mm7|chr5 (88468333-88468175) |
|
1-164, gnl|monDom2|scaffold_32 (16101699-16102150) |
|
1-164, gnl|oryCun1|scaffold_174112 (4969-4525) |
|
1-164, gnl|panTro1|chr3 (61846890-61846438) |
|
1-164, gnl|rheMac2|chr5 (58976011-58975573) |
|
1-164, gnl|rn3|chr14 (21119604-21119138) |
| |
|
360-1332, gnl|bosTau2|chr6 (48315506-48314521) |
|
360-1332, gnl|Hg17|chr4 (71887304-71886230) |
|
360-1332, gnl|Mm7|chr5 (88461995-88460989) |
|
tra (5.66224) |
|
spl (4.72509) |
|
mcp (4.26621) |
|
duo (4.14723) |
|
clu (3.70902) |
|
col (2.73011) |
|
cbl (2.64034) |
|
sin (2.27432) |
|
lin (1.89284) |
|
mgm (1.62308) |
|
csp (1.61186) |
|
rec (1.03842) |
|
cty (0.832639) |
|
cmu (0.745573) |
|
mgp (0.692042) |
|
jej (0.593531) |
|
cga (0.558191) |
|
ill (0.526778) |
|
kid (0.518941) |
|
cje (0.330469) |
|
liv (0.292569) |
|
lnt (0.284616) |
|
mga (0.160205) |
|
cly (0.120642) |
|
med (0.116252) |
|
eje (0.0988338) |
|
tra (5.66224) |
|
spl (4.72509) |
|
mcp (4.26621) |
|
duo (4.14723) |
|
clu (3.70902) |
|
col (2.73011) |
|
cbl (2.64034) |
|
sin (2.27432) |
|
lin (1.89284) |
|
mgm (1.62308) |
|
csp (1.61186) |
|
rec (1.03842) |
|
cty (0.832639) |
|
cmu (0.745573) |
|
mgp (0.692042) |
|
jej (0.593531) |
|
cga (0.558191) |
|
ill (0.526778) |
|
kid (0.518941) |
|
cje (0.330469) |
|
liv (0.292569) |
|
lnt (0.284616) |
|
mga (0.160205) |
|
cly (0.120642) |
|
med (0.116252) |
|
eje (0.0988338) |
