Ss1.1-rill313b_m10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGTTCTGGATCAAACTCAGGCACTGCCTCTGGTTATAAAATTGGGTAAATATGCTGTG AGGCACATCCCGCATTTCACCAACGAAGAGCTTGGCAGAGTCTTAGGCGCGTTCATCCAC TTTGGGCACAATGACAGGTTTTTTATCGAAGCCCTGGAGCAACATGTCACCTCACTCCGT CTCACTTTGGATCCCGAGGTTGTCAGCAAAGTCATGGAGTACTGCAGCAGAAAGCTGATT CTTTCCAAACCCATCCTCAATGCCGTGGCAGAAATGTTCGTGTGCCAATCAGAAAAATTT TCACCTCGCCAGATTTCTGAGTTACTTGAGCCATTTGGAAAACTCAATTATTTGCCACCA AATGCCTCTGCTTTATTTAGGAAGCTCGAAAACATACTGTTCACTCATTTCAATTTTTTT CCACCCAAAGCACTATTGAAACTTCTCCATTCCTGTTCGCTTATTGAATGCCACCCCGTC AACTTTATGGCCAAACTCTTCAGCCCGTATTTTCTTCAGCAGCTGCAAGGTGAAGAGTCC TCTTTGGACAGACTGAGCCTAGCACAGCTGACCCAACTTTTCTTAACCGCAGTCCTAGAA TGCCCTTTCTATAAGGGTCCCAAACTTCTCCCGAAATACCAAGTGAAGTCATTTCTTACT CCGTGCTCATCCCTGGAGACCCCCATGGACTTTCAGCTTTATAGATCTGTCATGCTTGGA CTGATTGACCTTTTAGGAGCCAGGCTGTATTTTGCTTCGAAAGTGTTGACACCCTATTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGTTCTGGATCAAACTCAGGCACTGCCTCTGGTTATAAAATTGGGTAAATATGCTGTG AGGCACATCCCGCATTTCACCAACGAAGAGCTTGGCAGAGTCTTAGGCGCGTTCATCCAC TTTGGGCACAATGACAGGTTTTTTATCGAAGCCCTGGAGCAACATGTCACCTCACTCCGT CTCACTTTGGATCCCGAGGTTGTCAGCAAAGTCATGGAGTACTGCAGCAGAAAGCTGATT CTTTCCAAACCCATCCTCAATGCCGTGGCAGAAATGTTCGTGTGCCAATCAGAAAAATTT TCACCTCGCCAGATTTCTGAGTTACTTGAGCCATTTGGAAAACTCAATTATTTGCCACCA AATGCCTCTGCTTTATTTAGGAAGCTCGAAAACATACTGTTCACTCATTTCAATTTTTTT CCACCCAAAGCACTATTGAAACTTCTCCATTCCTGTTCGCTTATTGAATGCCACCCCGTC AACTTTATGGCCAAACTCTTCAGCCCGTATTTTCTTCAGCAGCTGCAAGGTGAAGAGTCC TCTTTGGACAGACTGAGCCTAGCACAGCTGACCCAACTTTTCTTAACCGCAGTCCTAGAA TGCCCTTTCTATAAGGGTCCCAAACTTCTCCCGAAATACCAAGTGAAGTCATTTCTTACT CCGTGCTCATCCCTGGAGACCCCCATGGACTTTCAGCTTTATAGATCTGTCATGCTTGGA CTGATTGACCTTTTAGGAGCCAGGCTGTATTTTGCTTCGAAAGTGTTGACACCCTATTGT |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-533, gnl|bosTau2|chr20 (38416268-38416800) | |
| 1-533, gnl|canFam2|chr34 (9106378-9105657) | |
| 1-533, gnl|danRer3|chrUn (174089824-174089128) | |
| 1-533, gnl|dasNov1|scaffold_485 (118045-117351) | |
| 1-533, gnl|echTel1|scaffold_184498 (1361-665) | |
| 1-533, gnl|fr1|chrUn (3098871-3098151) | |
| 1-533, gnl|galGal2|chr2 (79211962-79211266) | |
| 1-533, gnl|hg17|chr5 (7919728-7920451) | |
| 1-533, gnl|Hg17|chr5 (7920287-7919755) | |
| 1-533, gnl|loxAfr1|scaffold_48935 (7550-8270) | |
| 1-533, gnl|mm7|chr13 (65494789-65494082) | |
| 1-533, gnl|Mm7|chr13 (65494244-65494776) | |
| 1-533, gnl|monDom2|scaffold_4 (27177620-27178328) | |
| 1-533, gnl|oryCun1|scaffold_173855 (46457-45736) | |
| 1-533, gnl|panTro1|chr4 (8109987-8110710) | |
| 1-533, gnl|rheMac2|chr6 (7712748-7713471) | |
| 1-533, gnl|rn3|chr17 (5083326-5084029) | |
| 1-533, gnl|tetNig1|chr6 (4554189-4553493) | |
| 1-533, gnl|xenTro1|scaffold_1213 (109322-108629) | |
| 614-779, gnl|bosTau2|chr20 (38420409-38420574) | |
| 614-779, gnl|Hg17|chr5 (7916112-7915947) | |
| 614-779, gnl|Mm7|chr13 (65497428-65497593) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-533, gnl|bosTau2|chr20 (38416268-38416800) | |
| 1-533, gnl|canFam2|chr34 (9106378-9105657) | |
| 1-533, gnl|danRer3|chrUn (174089824-174089128) | |
| 1-533, gnl|dasNov1|scaffold_485 (118045-117351) | |
| 1-533, gnl|echTel1|scaffold_184498 (1361-665) | |
| 1-533, gnl|fr1|chrUn (3098871-3098151) | |
| 1-533, gnl|galGal2|chr2 (79211962-79211266) | |
| 1-533, gnl|hg17|chr5 (7919728-7920451) | |
| 1-533, gnl|Hg17|chr5 (7920287-7919755) | |
| 1-533, gnl|loxAfr1|scaffold_48935 (7550-8270) | |
| 1-533, gnl|mm7|chr13 (65494789-65494082) | |
| 1-533, gnl|Mm7|chr13 (65494244-65494776) | |
| 1-533, gnl|monDom2|scaffold_4 (27177620-27178328) | |
| 1-533, gnl|oryCun1|scaffold_173855 (46457-45736) | |
| 1-533, gnl|panTro1|chr4 (8109987-8110710) | |
| 1-533, gnl|rheMac2|chr6 (7712748-7713471) | |
| 1-533, gnl|rn3|chr17 (5083326-5084029) | |
| 1-533, gnl|tetNig1|chr6 (4554189-4553493) | |
| 1-533, gnl|xenTro1|scaffold_1213 (109322-108629) | |
| 614-779, gnl|bosTau2|chr20 (38420409-38420574) | |
| 614-779, gnl|Hg17|chr5 (7916112-7915947) | |
| 614-779, gnl|Mm7|chr13 (65497428-65497593) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| jej (0.0989218) |