Ss1.1-rill315b_g15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGACGTATTCAGTAGGAGTAAAGGAGGAGAATTACAGGTTCCAGGATAACCTCTTTCTA GAGAAGGCCATGCAACTTGCCAAGCAGCACGCCAATGCCCTTTTTGACTATGCAGTGACA GGAGATGTGAAGATGCTGCTGGCTGTCCAGCGCCATCTCACTGCAGTGCAGGATGAGAAT GGGGACAGTGTCTTACACTTGGCAATCATCCACCTTCATGCTCAGCTTGTGAGAGACCTG CTAGAAGTCACATCTGGTTTGATTTCTGATGAAATTATCAACATGAGAAATGATCTCTAC CAGACACCCTTGCACTTGGCAGTGATCACCAAGCAGGAGGCTGTGGTGGAGGACTTGCTG AGGGCAGGGGCCGACCTGAGTCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACCTCGCT GCCAAAGAAGGACATGATAAAATTCTCAGTATTTTACTCAAGCACAAAAAGGCAGCACTA CTTATCAACCACCCCAACGGTGAAGGTCTGAACGCTATTCACGTGGCCATGATGAGCAAC AGCTTGCCGTGTCTGCTGCTGCTGATGGCCGCGGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGACGTATTCAGTAGGAGTAAAGGAGGAGAATTACAGGTTCCAGGATAACCTCTTTCTA GAGAAGGCCATGCAACTTGCCAAGCAGCACGCCAATGCCCTTTTTGACTATGCAGTGACA GGAGATGTGAAGATGCTGCTGGCTGTCCAGCGCCATCTCACTGCAGTGCAGGATGAGAAT GGGGACAGTGTCTTACACTTGGCAATCATCCACCTTCATGCTCAGCTTGTGAGAGACCTG CTAGAAGTCACATCTGGTTTGATTTCTGATGAAATTATCAACATGAGAAATGATCTCTAC CAGACACCCTTGCACTTGGCAGTGATCACCAAGCAGGAGGCTGTGGTGGAGGACTTGCTG AGGGCAGGGGCCGACCTGAGTCTTCTGGACCGCTTGGGTAACTCTGTTTTGCACCTCGCT GCCAAAGAAGGACATGATAAAATTCTCAGTATTTTACTCAAGCACAAAAAGGCAGCACTA CTTATCAACCACCCCAACGGTGAAGGTCTGAACGCTATTCACGTGGCCATGATGAGCAAC AGCTTGCCGTGTCTGCTGCTGCTGATGGCCGCGGGG |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 46-188, gnl|bosTau2|chr6 (7223168-7223026) | |
| 46-188, gnl|Hg17|chr4 (103875869-103876011) | |
| 46-188, gnl|Mm7|chr3 (135398196-135398054) | |
| 302-507, gnl|bosTau2|chr6 (7213819-7213614) | |
| 302-507, gnl|canFam2|chr32 (26952920-26953174) | |
| 302-507, gnl|dasNov1|scaffold_17470 (52721-52983) | |
| 302-507, gnl|echTel1|scaffold_321808 (7007-7262) | |
| 302-507, gnl|galGal2|chr4 (61350818-61351038) | |
| 302-507, gnl|hg17|chr4 (103884816-103885067) | |
| 302-507, gnl|Hg17|chr4 (103884844-103885049) | |
| 302-507, gnl|loxAfr1|scaffold_188 (113772-113514) | |
| 302-507, gnl|mm7|chr3 (135389442-135389194) | |
| 302-507, gnl|Mm7|chr3 (135389412-135389207) | |
| 302-507, gnl|monDom2|scaffold_37 (9089268-9089028) | |
| 302-507, gnl|oryCun1|scaffold_201204 (50621-50367) | |
| 302-507, gnl|panTro1|chr3 (120280160-120280411) | |
| 302-507, gnl|rheMac2|chr5 (95585624-95585874) | |
| 302-507, gnl|rn3|chr2 (233087730-233087482) | |
| 302-507, gnl|tetNig1|chrUn_random (83752451-83752699) | |
| 302-507, gnl|xenTro1|scaffold_326 (441137-440909) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 46-188, gnl|bosTau2|chr6 (7223168-7223026) | |
| 46-188, gnl|Hg17|chr4 (103875869-103876011) | |
| 46-188, gnl|Mm7|chr3 (135398196-135398054) | |
| 302-507, gnl|bosTau2|chr6 (7213819-7213614) | |
| 302-507, gnl|canFam2|chr32 (26952920-26953174) | |
| 302-507, gnl|dasNov1|scaffold_17470 (52721-52983) | |
| 302-507, gnl|echTel1|scaffold_321808 (7007-7262) | |
| 302-507, gnl|galGal2|chr4 (61350818-61351038) | |
| 302-507, gnl|hg17|chr4 (103884816-103885067) | |
| 302-507, gnl|Hg17|chr4 (103884844-103885049) | |
| 302-507, gnl|loxAfr1|scaffold_188 (113772-113514) | |
| 302-507, gnl|mm7|chr3 (135389442-135389194) | |
| 302-507, gnl|Mm7|chr3 (135389412-135389207) | |
| 302-507, gnl|monDom2|scaffold_37 (9089268-9089028) | |
| 302-507, gnl|oryCun1|scaffold_201204 (50621-50367) | |
| 302-507, gnl|panTro1|chr3 (120280160-120280411) | |
| 302-507, gnl|rheMac2|chr5 (95585624-95585874) | |
| 302-507, gnl|rn3|chr2 (233087730-233087482) | |
| 302-507, gnl|tetNig1|chrUn_random (83752451-83752699) | |
| 302-507, gnl|xenTro1|scaffold_326 (441137-440909) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ill (0.175593) | |
| cag (0.151194) | |
| hyp (0.142837) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| cag (0.151194) | |
| hyp (0.142837) | |
| cty (0.10408) |