Non-Coding RNA Search

Ss1.1-rill316b_i14.5

Sequence:


               
               TAGAAAATACCCATGTTTGCTGGTGATAGGCAGTATTTTGGCCACTGGGATGATACAATA
TTTATCACATGCTTGCTAAGTGTTAGTCTATACACATGCTGTGTGTCCTTTAACCCTGTA
AATGGTCCTTATAATTCCTAGCAGTGGTACCATCATCCTCATGTCTTAGATGGGGAAATT
GGGGCTCACTGTGCTTTGCCCAAAGGCCCAGAGCTGACGCCTGAAGCTAGGAAATGGCAG
AGCCAGGATTCTAGCCCAGGTGAGCCGGATCCATAGCTTGTGTTTTTAACCACTCCACAG
GAGCATCCAGTATCTCTATATTTCCAGGAAGTCCCAGTTAATAGTTATTGGATCAGTACA
TGCTGTGGATGACTATAATTGAAATACTTGGGTTTCTCCATTGATCTAGTATCCCTATAA
TCATTAACCATGAAATATTTACACAGCCAGTAAATATATATCTCAAAGTGCTTCACTTTA
AAAACTATGGAAAGGAAAGGAAAATGTGGAAAGATGGGTCAAAGTCAATAGGAGCTAACT
GTTGATTTCCATCATGGAGCAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGAAAATACCCATGTTTGCTGGTGATAGGCAGTATTTTGGCCACTGGGATGATACAATA
TTTATCACATGCTTGCTAAGTGTTAGTCTATACACATGCTGTGTGTCCTTTAACCCTGTA
AATGGTCCTTATAATTCCTAGCAGTGGTACCATCATCCTCATGTCTTAGATGGGGAAATT
GGGGCTCACTGTGCTTTGCCCAAAGGCCCAGAGCTGACGCCTGAAGCTAGGAAATGGCAG
AGCCAGGATTCTAGCCCAGGTGAGCCGGATCCATAGCTTGTGTTTTTAACCACTCCACAG
GAGCATCCAGTATCTCTATATTTCCAGGAAGTCCCAGTTAATAGTTATTGGATCAGTACA
TGCTGTGGATGACTATAATTGAAATACTTGGGTTTCTCCATTGATCTAGTATCCCTATAA
TCATTAACCATGAAATATTTACACAGCCAGTAAATATATATCTCAAAGTGCTTCACTTTA
AAAACTATGGAAAGGAAAGGAAAATGTGGAAAGATGGGTCAAAGTCAATAGGAGCTAACT
GTTGATTTCCATCATGGAGCAAAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-514, gnl|bosTau2|chr29 (17190379-17189866)
               

               
               1-514, gnl|Hg17|chr11 (20361924-20362438)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-514, gnl|bosTau2|chr29 (17190379-17189866)
               

               
               1-514, gnl|Hg17|chr11 (20361924-20362438)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               sin (0.174948)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               sin (0.174948)

	1-514, gnl\|bosTau2\|chr29 (17190379-17189866)
	1-514, gnl\|Hg17\|chr11 (20361924-20362438)