Ss1.1-rill319b_o21.5
|
GAGGCAAGGCAGTGTGGAGCAACGAAGAAAGTCCTAGCCTTGGCCCTGCTGAAGGCCACC
CAGGAAAGGGCCCCTTTCTGAACTCCCCCATGGTCACCTATAAAATGGGTTGGTCAGCCC
CCATGGTCCCAGAACTCTCATCCAGCTCTGCCATTCTGTGGTTTTAGGAGAGAACAGCAG
GCCTCTGAAGAAGGGGTCAGGGAGTTTTCATTCTTTCCTTTTTTTTTTTTTCAGGGCCTC
ACCTGCGGCATAAGGAGGTTCCCAGGCTGGGGACCGCTGGCCTACACCACAGCCACAGTA
ACACGGGATCCGAGCTGCATCTGCGACCTACACCACAGCTCACGGCAGTGCTGGATCCTT
AACCCACTGAGCATGGTCGGGGATCGAACCTGCGTCCTCATCCACGCAGTCGGATTCATT
TCCGCTGAGCCACGACGGGAACTCCAGTTTTCATTCTTGAACCCTTGGCCTCAGCCCTAA
GCTAAGGTCCTTAAACCTGTGGTCCCACTGGAGGTCAGCAGCAGAATACAGGCAGGTTTG
GCTAGCAGAACCCCTGTCCTCCCCCCCCCCCCCATCTCTCTTCCTCAGTTCCCTGATCCT
GGGATACCTCCTAGATGTAGCCCAGGCCTCCCACCTCCGTGGCCTCTGCTTTCACATGGG
TGAAGTCTGTGTGCCCACACCCCCAGCCTTGTCCAGCAGGTGCCCTAAAGACCCACTAAG
GGATCACATAGGAACTTGCTGCCATGTGAGTGTGCTGGCTCTAACTCTGAGGCATTTAAA
ATAAGATTCTGATTGAAAGTAGGCCCTGGCTCTGAAACTCAGTAAGAACCGGCTGGTTGG
TGAGGGGAGGAGGCGGCTGGACCTTCAGTCTGGCTGTGATGACCATCTTGGCAGCGGCAA
GGCAGTGCTTGGGCCTCTCCTCCCAGCATCTTCCCCTCAGCCCCACCCAGGACACTGATT
TCCAGCTCCAAGCCCAGGCCCGCAGTGCTTTCTCTCTTCCTAGGGAGTTGATCACAGGTT
TTATAGCAAAGGGCTGTCCTGTCCTCTTTCCACTGTCACAGCCTTTAATAAAGATGCGAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAGGCAAGGCAGTGTGGAGCAACGAAGAAAGTCCTAGCCTTGGCCCTGCTGAAGGCCACC
CAGGAAAGGGCCCCTTTCTGAACTCCCCCATGGTCACCTATAAAATGGGTTGGTCAGCCC
CCATGGTCCCAGAACTCTCATCCAGCTCTGCCATTCTGTGGTTTTAGGAGAGAACAGCAG
GCCTCTGAAGAAGGGGTCAGGGAGTTTTCATTCTTTCCTTTTTTTTTTTTTCAGGGCCTC
ACCTGCGGCATAAGGAGGTTCCCAGGCTGGGGACCGCTGGCCTACACCACAGCCACAGTA
ACACGGGATCCGAGCTGCATCTGCGACCTACACCACAGCTCACGGCAGTGCTGGATCCTT
AACCCACTGAGCATGGTCGGGGATCGAACCTGCGTCCTCATCCACGCAGTCGGATTCATT
TCCGCTGAGCCACGACGGGAACTCCAGTTTTCATTCTTGAACCCTTGGCCTCAGCCCTAA
GCTAAGGTCCTTAAACCTGTGGTCCCACTGGAGGTCAGCAGCAGAATACAGGCAGGTTTG
GCTAGCAGAACCCCTGTCCTCCCCCCCCCCCCCATCTCTCTTCCTCAGTTCCCTGATCCT
GGGATACCTCCTAGATGTAGCCCAGGCCTCCCACCTCCGTGGCCTCTGCTTTCACATGGG
TGAAGTCTGTGTGCCCACACCCCCAGCCTTGTCCAGCAGGTGCCCTAAAGACCCACTAAG
GGATCACATAGGAACTTGCTGCCATGTGAGTGTGCTGGCTCTAACTCTGAGGCATTTAAA
ATAAGATTCTGATTGAAAGTAGGCCCTGGCTCTGAAACTCAGTAAGAACCGGCTGGTTGG
TGAGGGGAGGAGGCGGCTGGACCTTCAGTCTGGCTGTGATGACCATCTTGGCAGCGGCAA
GGCAGTGCTTGGGCCTCTCCTCCCAGCATCTTCCCCTCAGCCCCACCCAGGACACTGATT
TCCAGCTCCAAGCCCAGGCCCGCAGTGCTTTCTCTCTTCCTAGGGAGTTGATCACAGGTT
TTATAGCAAAGGGCTGTCCTGTCCTCTTTCCACTGTCACAGCCTTTAATAAAGATGCGAA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-215, gnl|bosTau2|chr21 (24024045-24024263) |
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2-215, gnl|canFam2|chr30 (40276467-40276890) |
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2-215, gnl|dasNov1|scaffold_161006 (4318-3937) |
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2-215, gnl|hg17|chr15 (72125378-72125849) |
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2-215, gnl|Hg17|chr15 (72125385-72125606) |
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2-215, gnl|mm7|chr9 (58247515-58247110) |
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2-215, gnl|Mm7|chr9 (58247504-58247299) |
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2-215, gnl|panTro1|chr16_random (21260293-21260764) |
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2-215, gnl|rheMac2|chr7 (52732787-52733252) |
| |
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633-1080, gnl|bosTau2|chr21 (24024411-24024872) |
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633-1080, gnl|Mm7|chr9 (58247148-58246546) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-215, gnl|bosTau2|chr21 (24024045-24024263) |
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2-215, gnl|canFam2|chr30 (40276467-40276890) |
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2-215, gnl|dasNov1|scaffold_161006 (4318-3937) |
|
2-215, gnl|hg17|chr15 (72125378-72125849) |
|
2-215, gnl|Hg17|chr15 (72125385-72125606) |
|
2-215, gnl|mm7|chr9 (58247515-58247110) |
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2-215, gnl|Mm7|chr9 (58247504-58247299) |
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2-215, gnl|panTro1|chr16_random (21260293-21260764) |
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2-215, gnl|rheMac2|chr7 (52732787-52733252) |
| |
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633-1080, gnl|bosTau2|chr21 (24024411-24024872) |
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633-1080, gnl|Mm7|chr9 (58247148-58246546) |
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ill (0.175593) |
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csp (0.161186) |
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cag (0.151194) |
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cbl (0.114797) |
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ill (0.175593) |
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csp (0.161186) |
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cag (0.151194) |
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cbl (0.114797) |
