Ss1.1-rill322b_i17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCATTGGAATTCACTCAGGTCCCTGTGCTGCTGGAGTTGTGGGGATCAAGATGCCTCGTT ATTGCCTGTTTGGAGATACAGTCAACACAGCCTCTCGGATGGAATCCACTGGCCTCCCCT TGAGAATTCATGTGAGCGGCTCCACGATAGCCATCCTGAAGAGAACCGAGTGCCAGTTCC TGTATGAAGTGAGAGGGGAAACGTACTTAAAGGGAAGAGGAACTGAGACCACCTATTGGC TGACCGGGGTGAAGGACCAGGAGTACAACCTGCCAACCCCACCTACCGCGGAGAATCAAC AGCGCTTGCAAGCCGAGTTTGTAGACATGATCGCCAGCTCTTTACAGAAGAGACAGGCCT CCGGGATAAAGAACCGAAAACCAACCCGGGTAGCCAGCTACAAGAAAGGCACCCTGGAGT ACTTGCAACTCAACACAACAGACAATGAGAGCACCCACTTTTAAACCTCACTTAGGGCGA AGGACTCAGGCAAATGAAGTCCAGCTGCGACCTCAAGCGCCCTGAAGCTTGCATTTCCAG GAGACCTCAGTGGAACAGAAGATCTTAGCTGCAACCTGCTCAGCCTCAGCTGCCCTGTCT GGAACGTAGACTTGCCTCTGTGAATCAGATATGCGCTCTAGGGCCTGATAACAGTTTCCC CAGGGAGTTTCGACCTGGGAAAGAAGAGGAATGGAAGGTACCATCTCAAAGCTGAGGAGA TTCTTCTTCTCATTTCGCTTATTTTGTTTGCCTTTTTTTGGTTTACTGGCTTCTTTTCCT TCTGTGTTCATGATAAGATGTTAAATTGTCACAATTGTATTTTAAGTACTTTATCTCCAT TAAATTATATTTAACTTGTCATTTTTGCAGAAAAGATGCTGTATATGAGGCAGGAATAAA AGTTCAATGTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCATTGGAATTCACTCAGGTCCCTGTGCTGCTGGAGTTGTGGGGATCAAGATGCCTCGTT ATTGCCTGTTTGGAGATACAGTCAACACAGCCTCTCGGATGGAATCCACTGGCCTCCCCT TGAGAATTCATGTGAGCGGCTCCACGATAGCCATCCTGAAGAGAACCGAGTGCCAGTTCC TGTATGAAGTGAGAGGGGAAACGTACTTAAAGGGAAGAGGAACTGAGACCACCTATTGGC TGACCGGGGTGAAGGACCAGGAGTACAACCTGCCAACCCCACCTACCGCGGAGAATCAAC AGCGCTTGCAAGCCGAGTTTGTAGACATGATCGCCAGCTCTTTACAGAAGAGACAGGCCT CCGGGATAAAGAACCGAAAACCAACCCGGGTAGCCAGCTACAAGAAAGGCACCCTGGAGT ACTTGCAACTCAACACAACAGACAATGAGAGCACCCACTTTTAAACCTCACTTAGGGCGA AGGACTCAGGCAAATGAAGTCCAGCTGCGACCTCAAGCGCCCTGAAGCTTGCATTTCCAG GAGACCTCAGTGGAACAGAAGATCTTAGCTGCAACCTGCTCAGCCTCAGCTGCCCTGTCT GGAACGTAGACTTGCCTCTGTGAATCAGATATGCGCTCTAGGGCCTGATAACAGTTTCCC CAGGGAGTTTCGACCTGGGAAAGAAGAGGAATGGAAGGTACCATCTCAAAGCTGAGGAGA TTCTTCTTCTCATTTCGCTTATTTTGTTTGCCTTTTTTTGGTTTACTGGCTTCTTTTCCT TCTGTGTTCATGATAAGATGTTAAATTGTCACAATTGTATTTTAAGTACTTTATCTCCAT TAAATTATATTTAACTTGTCATTTTTGCAGAAAAGATGCTGTATATGAGGCAGGAATAAA AGTTCAATGTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 16-117, gnl|bosTau2|chr5 (56866624-56866523) | |
| 16-117, gnl|canFam2|chr27 (35002635-35002490) | |
| 16-117, gnl|danRer3|chrNA (170531203-170531093) | |
| 16-117, gnl|echTel1|scaffold_313685 (11379-11527) | |
| 16-117, gnl|fr1|chrUn (246312722-246312604) | |
| 16-117, gnl|galGal2|chr1 (45678974-45679123) | |
| 16-117, gnl|hg17|chr12 (14663406-14663554) | |
| 16-117, gnl|Hg17|chr12 (14663513-14663412) | |
| 16-117, gnl|loxAfr1|scaffold_25024 (40996-41144) | |
| 16-117, gnl|mm7|chr6 (136728592-136728746) | |
| 16-117, gnl|Mm7|chr6 (136728699-136728598) | |
| 16-117, gnl|monDom2|scaffold_31 (15929939-15929801) | |
| 16-117, gnl|oryCun1|scaffold_168796 (3112-2964) | |
| 16-117, gnl|panTro1|chrUn_random (40920327-40920475) | |
| 16-117, gnl|rheMac2|chr11 (15002308-15002456) | |
| 16-117, gnl|rn3|chr4 (173937894-173937755) | |
| 16-117, gnl|tetNig1|chrUn_random (100576806-100576700) | |
| 16-117, gnl|xenTro1|scaffold_44 (442150-442022) | |
| 290-638, gnl|bosTau2|chr5 (56862543-56862179) | |
| 290-638, gnl|Hg17|chr12 (14657492-14657142) | |
| 290-638, gnl|Mm7|chr6 (136722424-136721966) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 16-117, gnl|bosTau2|chr5 (56866624-56866523) | |
| 16-117, gnl|canFam2|chr27 (35002635-35002490) | |
| 16-117, gnl|danRer3|chrNA (170531203-170531093) | |
| 16-117, gnl|echTel1|scaffold_313685 (11379-11527) | |
| 16-117, gnl|fr1|chrUn (246312722-246312604) | |
| 16-117, gnl|galGal2|chr1 (45678974-45679123) | |
| 16-117, gnl|hg17|chr12 (14663406-14663554) | |
| 16-117, gnl|Hg17|chr12 (14663513-14663412) | |
| 16-117, gnl|loxAfr1|scaffold_25024 (40996-41144) | |
| 16-117, gnl|mm7|chr6 (136728592-136728746) | |
| 16-117, gnl|Mm7|chr6 (136728699-136728598) | |
| 16-117, gnl|monDom2|scaffold_31 (15929939-15929801) | |
| 16-117, gnl|oryCun1|scaffold_168796 (3112-2964) | |
| 16-117, gnl|panTro1|chrUn_random (40920327-40920475) | |
| 16-117, gnl|rheMac2|chr11 (15002308-15002456) | |
| 16-117, gnl|rn3|chr4 (173937894-173937755) | |
| 16-117, gnl|tetNig1|chrUn_random (100576806-100576700) | |
| 16-117, gnl|xenTro1|scaffold_44 (442150-442022) | |
| 290-638, gnl|bosTau2|chr5 (56862543-56862179) | |
| 290-638, gnl|Hg17|chr12 (14657492-14657142) | |
| 290-638, gnl|Mm7|chr6 (136722424-136721966) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cje (0.330469) | |
| ill (0.175593) | |
| eep (0.122564) | |
| jej (0.0989218) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cje (0.330469) | |
| ill (0.175593) | |
| eep (0.122564) | |
| jej (0.0989218) |