Non-Coding RNA Search

Ss1.1-rill328b_g11.5

Sequence:


               
               GAGCTCAGCAGCCTCTCTGCCCTCACTGTGATCTTCCTCCTTCTCTGCCTCCACATGGCA
CAGCCCGGATTCCAGCAGGGTGTGTGGAGGGCTCTGCGGTCTTACGTGTGGTTGGGGTGG
GGGGATGCTTCTTCTGCCCTCACTGTGATCTTCCTCCTTCTCTGCCTCCACATGGCACAG
CCCGGATTCCAGCAGGATGTCAATAAACCTGGATATTGCCCAGAGTTTTTTCTTTCCTGC
CCTTTTGTCCTTTTACCTCTATGTCAGCGCGATAAAGGTTGCAAGGGTTCCAAGAAGTGT
TGTTTCTACAACTGCAGACGTCAGTGTATGGACCCGTGGCCGACTTTGGACTGAGGTAGA
AACCCCTCCTCAACCAGGCCTGAGAAGATGCTGCGGATTCCAGGCTCAGACTTGAATAAT
TCATTTCCAGTTTTTCCCAGCTCCCCTGGTTCCCAAGACTTCTTTTTATTAAGCTCATGT
AGTTCCCTGTTATACAGTGAATCCTTGTTGACTAAAAAAAAAAGAGAGAGAGAGAGTTAA
ATGCTTCTCAGTGTGAAAATGACACAAAGAAATAAAGTGTTATCTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCTCAGCAGCCTCTCTGCCCTCACTGTGATCTTCCTCCTTCTCTGCCTCCACATGGCA
CAGCCCGGATTCCAGCAGGGTGTGTGGAGGGCTCTGCGGTCTTACGTGTGGTTGGGGTGG
GGGGATGCTTCTTCTGCCCTCACTGTGATCTTCCTCCTTCTCTGCCTCCACATGGCACAG
CCCGGATTCCAGCAGGATGTCAATAAACCTGGATATTGCCCAGAGTTTTTTCTTTCCTGC
CCTTTTGTCCTTTTACCTCTATGTCAGCGCGATAAAGGTTGCAAGGGTTCCAAGAAGTGT
TGTTTCTACAACTGCAGACGTCAGTGTATGGACCCGTGGCCGACTTTGGACTGAGGTAGA
AACCCCTCCTCAACCAGGCCTGAGAAGATGCTGCGGATTCCAGGCTCAGACTTGAATAAT
TCATTTCCAGTTTTTCCCAGCTCCCCTGGTTCCCAAGACTTCTTTTTATTAAGCTCATGT
AGTTCCCTGTTATACAGTGAATCCTTGTTGACTAAAAAAAAAAGAGAGAGAGAGAGTTAA
ATGCTTCTCAGTGTGAAAATGACACAAAGAAATAAAGTGTTATCTATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-365, gnl|bosTau2|chr13 (55610263-55609890)
               

               
               2-365, gnl|Hg17|chr20 (43291876-43292261)
               

               
               2-365, gnl|Mm7|chr2 (163940922-163940537)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-365, gnl|bosTau2|chr13 (55610263-55609890)
               

               
               2-365, gnl|Hg17|chr20 (43291876-43292261)
               

               
               2-365, gnl|Mm7|chr2 (163940922-163940537)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               jej (0.197844)
               

               
               ill (0.175593)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)
               

               
               ill (0.175593)

	2-365, gnl\|bosTau2\|chr13 (55610263-55609890)
	2-365, gnl\|Hg17\|chr20 (43291876-43292261)
	2-365, gnl\|Mm7\|chr2 (163940922-163940537)