Non-Coding RNA Search

Ss1.1-rill329b_g4.5

Sequence:


               
               CATCCATGGGATCCGAGGTGTTGGAACAGCAGCCCTTAATATGTGCTTTGTGGCAGCTGG
AGTTGCAGATGCATTTTATGAAATGGGAATTCACTGCTGGGATATGGCAGGTGCTGGCAT
TATTGTTACTGAAGCTGGTGGAGTCCTCATGGATATAACAGGTGGACCATTTGATTTGAT
GTCACGAAGAGTAATTGCTTCGAGTAATAAAGCATTAGGAGAAAGAATAGCCAAAGAAAT
TCAGATAATACCTCTTCAAAGAGATGATGAAGATTAATTTTAACAGCTTCACACATTCAG
TCCCAGTCACATCTCTCGAGGCTTGCTGGTGCATTGATGGGTGTTACAGAATTCGGGACA
TCTGTTCTACCTGAATAATATGATTGGCTTAAATTGTCTTTGATGCCCAGATTGAAAAAT
TGCTACTTGTTCTGCATTTTACTAAGAGTAGGCATGCAAGAATGGATGAAATATTTGCTT
TAAAAATTTCTGTGTGTTAAGACTGTACTCTGGGAAAAAAGACGCAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCCATGGGATCCGAGGTGTTGGAACAGCAGCCCTTAATATGTGCTTTGTGGCAGCTGG
AGTTGCAGATGCATTTTATGAAATGGGAATTCACTGCTGGGATATGGCAGGTGCTGGCAT
TATTGTTACTGAAGCTGGTGGAGTCCTCATGGATATAACAGGTGGACCATTTGATTTGAT
GTCACGAAGAGTAATTGCTTCGAGTAATAAAGCATTAGGAGAAAGAATAGCCAAAGAAAT
TCAGATAATACCTCTTCAAAGAGATGATGAAGATTAATTTTAACAGCTTCACACATTCAG
TCCCAGTCACATCTCTCGAGGCTTGCTGGTGCATTGATGGGTGTTACAGAATTCGGGACA
TCTGTTCTACCTGAATAATATGATTGGCTTAAATTGTCTTTGATGCCCAGATTGAAAAAT
TGCTACTTGTTCTGCATTTTACTAAGAGTAGGCATGCAAGAATGGATGAAATATTTGCTT
TAAAAATTTCTGTGTGTTAAGACTGTACTCTGGGAAAAAAGACGCAGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               160-517, gnl|bosTau2|chr14 (49814249-49813889)
               

               
               160-517, gnl|Hg17|chr8 (82734258-82733916)
               

               
               160-517, gnl|Mm7|chr3 (10323488-10323170)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               160-517, gnl|bosTau2|chr14 (49814249-49813889)
               

               
               160-517, gnl|Hg17|chr8 (82734258-82733916)
               

               
               160-517, gnl|Mm7|chr3 (10323488-10323170)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               ski (0.146735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               ski (0.146735)

	160-517, gnl\|bosTau2\|chr14 (49814249-49813889)
	160-517, gnl\|Hg17\|chr8 (82734258-82733916)
	160-517, gnl\|Mm7\|chr3 (10323488-10323170)