Ss1.1-rill332b_c18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTACTTCAAGTTTCCAAGAAGAAAACCTCATCTGTAGCACCCTGGACCTCTTCGTTGCT GGAACTGAGACCACGTCAACAACACTGCGCTGGGGTCTGCTGTACATGGCCCTGTACCCT GAAATCCAAGAGAAAGTCCAAGCTGAGATTGACAGGGTGCTTGGCCAATTACAGCAGCCG AGCACAGCAGCTCGAGAGTCCATGCCCTACACCAACGCCGTCATCCATGAGGTGCAGAGA ATGGGCAACATCATCCCCCTGAACGTGCCCCGGGAGGTGGCAGAGGATACCACCCTGGCT GGATACCACCTGCCCAAGGGGACGATGGTCATAACCAATCTGACTGCACTACATAGCGAC CCCACAGAGTGGGCCACCCCAGACACATTCAATCCAGAGCATTTTCTGGAGAATGGAAAG TTTAAGAAAAGGGAAGCCTTTCTGCCTTTCTCAGTAGGGAAGCGGGCGTGCCTTGGAGAG CAGCTGGCCAGGACTGAGCTGTTCGTTTTCTTTACTTCCCTTTTACAAAAATTCTCCTTC AGGCCTCCAGACAATGAGAAGCTGAGCCTCAAGTTCAGAATGGGCCTGACCCTCTCCCCA GTCACCTACCGCATCTGTGCAGTTCCCAGGGCATGAGGTTGTGGGGGGTGGAGGGGAAGG AAAGCAGGGAGAATGGGCACCTCCCCCAAGGCAGGGGCTCCTGCTCAGAAGTGAGGGGAC AGCATGAAGTGCCTCTGAGCACAGGTCCTAGGAACTGCACTCAGAAGAACCTGGATTCAA ACCCCAGCTTTGCCATCTCCAGTGTGGCCCTGGGCAAATCAGTTATGATGTATGTGAGTC ATTTGCCTTTTCACCTGGGAGATTTAAAGAGGATCATGATTGCTTCTGTAAAGGAAGAAC TGCTGTAAAAATCAGGAGAAATAAAAGACTTTAACTGGTTTGGAAACCATAAAGCTCATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTACTTCAAGTTTCCAAGAAGAAAACCTCATCTGTAGCACCCTGGACCTCTTCGTTGCT GGAACTGAGACCACGTCAACAACACTGCGCTGGGGTCTGCTGTACATGGCCCTGTACCCT GAAATCCAAGAGAAAGTCCAAGCTGAGATTGACAGGGTGCTTGGCCAATTACAGCAGCCG AGCACAGCAGCTCGAGAGTCCATGCCCTACACCAACGCCGTCATCCATGAGGTGCAGAGA ATGGGCAACATCATCCCCCTGAACGTGCCCCGGGAGGTGGCAGAGGATACCACCCTGGCT GGATACCACCTGCCCAAGGGGACGATGGTCATAACCAATCTGACTGCACTACATAGCGAC CCCACAGAGTGGGCCACCCCAGACACATTCAATCCAGAGCATTTTCTGGAGAATGGAAAG TTTAAGAAAAGGGAAGCCTTTCTGCCTTTCTCAGTAGGGAAGCGGGCGTGCCTTGGAGAG CAGCTGGCCAGGACTGAGCTGTTCGTTTTCTTTACTTCCCTTTTACAAAAATTCTCCTTC AGGCCTCCAGACAATGAGAAGCTGAGCCTCAAGTTCAGAATGGGCCTGACCCTCTCCCCA GTCACCTACCGCATCTGTGCAGTTCCCAGGGCATGAGGTTGTGGGGGGTGGAGGGGAAGG AAAGCAGGGAGAATGGGCACCTCCCCCAAGGCAGGGGCTCCTGCTCAGAAGTGAGGGGAC AGCATGAAGTGCCTCTGAGCACAGGTCCTAGGAACTGCACTCAGAAGAACCTGGATTCAA ACCCCAGCTTTGCCATCTCCAGTGTGGCCCTGGGCAAATCAGTTATGATGTATGTGAGTC ATTTGCCTTTTCACCTGGGAGATTTAAAGAGGATCATGATTGCTTCTGTAAAGGAAGAAC TGCTGTAAAAATCAGGAGAAATAAAAGACTTTAACTGGTTTGGAAACCATAAAGCTCATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 129-319, gnl|bosTau2|chr3 (57491614-57491804) | |
| 129-319, gnl|canFam2|chr5 (52977536-52977368) | |
| 129-319, gnl|danRer3|chrNA (157462400-157462568) | |
| 129-319, gnl|dasNov1|scaffold_58974 (4353-4194) | |
| 129-319, gnl|echTel1|scaffold_284533 (41433-41265) | |
| 129-319, gnl|fr1|chrUn (71435043-71434877) | |
| 129-319, gnl|galGal2|chr8 (26920139-26920307) | |
| 129-319, gnl|hg17|chr1 (60082561-60082729) | |
| 129-319, gnl|Hg17|chr1 (60082753-60082563) | |
| 129-319, gnl|loxAfr1|scaffold_34 (164816-164984) | |
| 129-319, gnl|mm7|chr4 (95918443-95918611) | |
| 129-319, gnl|Mm7|chr4 (95918635-95918445) | |
| 129-319, gnl|monDom2|scaffold_40 (15347070-15346902) | |
| 129-319, gnl|oryCun1|scaffold_38652 (1874-1706) | |
| 129-319, gnl|panTro1|chr1 (58417186-58417354) | |
| 129-319, gnl|rheMac2|chr1 (62745334-62745502) | |
| 129-319, gnl|rn3|chr5 (116713391-116713559) | |
| 129-319, gnl|tetNig1|chr1_random (3002720-3002888) | |
| 129-319, gnl|xenTro1|scaffold_55 (66894-67059) | |
| 455-960, gnl|bosTau2|chr3 (57451113-57451619) | |
| 455-960, gnl|Hg17|chr1 (60071525-60071019) | |
| 455-960, gnl|Mm7|chr4 (95961512-95961049) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 129-319, gnl|bosTau2|chr3 (57491614-57491804) | |
| 129-319, gnl|canFam2|chr5 (52977536-52977368) | |
| 129-319, gnl|danRer3|chrNA (157462400-157462568) | |
| 129-319, gnl|dasNov1|scaffold_58974 (4353-4194) | |
| 129-319, gnl|echTel1|scaffold_284533 (41433-41265) | |
| 129-319, gnl|fr1|chrUn (71435043-71434877) | |
| 129-319, gnl|galGal2|chr8 (26920139-26920307) | |
| 129-319, gnl|hg17|chr1 (60082561-60082729) | |
| 129-319, gnl|Hg17|chr1 (60082753-60082563) | |
| 129-319, gnl|loxAfr1|scaffold_34 (164816-164984) | |
| 129-319, gnl|mm7|chr4 (95918443-95918611) | |
| 129-319, gnl|Mm7|chr4 (95918635-95918445) | |
| 129-319, gnl|monDom2|scaffold_40 (15347070-15346902) | |
| 129-319, gnl|oryCun1|scaffold_38652 (1874-1706) | |
| 129-319, gnl|panTro1|chr1 (58417186-58417354) | |
| 129-319, gnl|rheMac2|chr1 (62745334-62745502) | |
| 129-319, gnl|rn3|chr5 (116713391-116713559) | |
| 129-319, gnl|tetNig1|chr1_random (3002720-3002888) | |
| 129-319, gnl|xenTro1|scaffold_55 (66894-67059) | |
| 455-960, gnl|bosTau2|chr3 (57451113-57451619) | |
| 455-960, gnl|Hg17|chr1 (60071525-60071019) | |
| 455-960, gnl|Mm7|chr4 (95961512-95961049) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| duo (0.691204) | |
| jej (0.395687) | |
| col (0.195008) | |
| ill (0.175593) | |
| cje (0.165235) | |
| nco (0.161734) | |
| pla (0.133672) | |
| pgl (0.118483) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| duo (0.691204) | |
| jej (0.395687) | |
| col (0.195008) | |
| ill (0.175593) | |
| cje (0.165235) | |
| nco (0.161734) | |
| pla (0.133672) | |
| pgl (0.118483) |