Ss1.1-rill337b_f16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGGAGTAGGCAGGTCCGGGCTCGCGCTGCGGCCAGAGATGCTGTGGGGCCGCCACGGCG CTCGGCAGCCGGGAACACTGCGTTAAAAGCACCAAGGTAAAGTGAATTCTGAGGACCGAA GAGTTTGATGACACAGACCACTCAATTTCTTTGTTTGGAATACACGTTATGAACCCTTTC TGGAGCATGTCTACAAGCTCTGTACGCAAACGATCTGATGGTGAAGAGAAGACATTAACA GGGGACGTGAAAAGCAGTCCTCCTCGCACTGCTCCAAAGAAACAGCTGCCCTCTATTCCC AAAAATGCTTTGCCCATAACTAAGCCTACATCTCCTGCCCCAGCAACACAGTCAACAAAT GGCACACATGCGTCTTATGGACCTTTCTACCTGGAATACTCTCTTCTTGCAGAATTCACC TTGGTTGTGAAGCAGAAGTTACCGGGTGTCTATGTGCAGCCGTCTTACCGCTCTGCATTA ATGTGGTTTGGAGTAATATTCATACGGCATGGACTTTATCAAGATGGTGTATTTAAGTTT ACAGTTTATATCCCTGATAACTACCCAGATGGTGACTGTCCACGCTTGGTGTTTGATATT CCCGTCTTTCACCCGCTAGTCGATCCCAACTCTGGTGAACTGGATGTAAAGAGAGCATTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGGAGTAGGCAGGTCCGGGCTCGCGCTGCGGCCAGAGATGCTGTGGGGCCGCCACGGCG CTCGGCAGCCGGGAACACTGCGTTAAAAGCACCAAGGTAAAGTGAATTCTGAGGACCGAA GAGTTTGATGACACAGACCACTCAATTTCTTTGTTTGGAATACACGTTATGAACCCTTTC TGGAGCATGTCTACAAGCTCTGTACGCAAACGATCTGATGGTGAAGAGAAGACATTAACA GGGGACGTGAAAAGCAGTCCTCCTCGCACTGCTCCAAAGAAACAGCTGCCCTCTATTCCC AAAAATGCTTTGCCCATAACTAAGCCTACATCTCCTGCCCCAGCAACACAGTCAACAAAT GGCACACATGCGTCTTATGGACCTTTCTACCTGGAATACTCTCTTCTTGCAGAATTCACC TTGGTTGTGAAGCAGAAGTTACCGGGTGTCTATGTGCAGCCGTCTTACCGCTCTGCATTA ATGTGGTTTGGAGTAATATTCATACGGCATGGACTTTATCAAGATGGTGTATTTAAGTTT ACAGTTTATATCCCTGATAACTACCCAGATGGTGACTGTCCACGCTTGGTGTTTGATATT CCCGTCTTTCACCCGCTAGTCGATCCCAACTCTGGTGAACTGGATGTAAAGAGAGCATTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 46 entry(ies) | More info |
| Aligned organism(s): 46 entry(ies) | Help | Less info |
| 94-210, gnl|bosTau2|chr18 (21166183-21166067) | |
| 94-210, gnl|canFam2|chr8 (72459845-72459987) | |
| 94-210, gnl|dasNov1|scaffold_3119 (1306-1422) | |
| 94-210, gnl|echTel1|scaffold_151725 (525-408) | |
| 94-210, gnl|hg17|chr14 (100754288-100754408) | |
| 94-210, gnl|Hg17|chr16 (52091744-52091631) | |
| 94-210, gnl|loxAfr1|scaffold_3652 (33604-33492) | |
| 94-210, gnl|mm7|chr8 (89723611-89723723) | |
| 94-210, gnl|Mm7|chr8 (89723724-89723610) | |
| 94-210, gnl|oryCun1|scaffold_204392 (51031-50918) | |
| 94-210, gnl|panTro1|chr15 (101318321-101318441) | |
| 94-210, gnl|rheMac2|chr7 (164509164-164509284) | |
| 94-210, gnl|rn3|chr18 (3780294-3780188) | |
| 211-416, gnl|bosTau2|chr18 (21164886-21164681) | |
| 211-416, gnl|canFam2|chr2 (65138539-65138344) | |
| 211-416, gnl|danRer3|chr7 (25825588-25825395) | |
| 211-416, gnl|dasNov1|scaffold_71932 (5910-5713) | |
| 211-416, gnl|echTel1|scaffold_310948 (39746-39944) | |
| 211-416, gnl|fr1|chrUn (10502705-10502881) | |
| 211-416, gnl|galGal2|chr11 (4899836-4899658) | |
| 211-416, gnl|hg17|chr16 (52089774-52089972) | |
| 211-416, gnl|Hg17|chr16 (52090009-52089804) | |
| 211-416, gnl|loxAfr1|scaffold_3652 (35013-34820) | |
| 211-416, gnl|mm7|chr8 (89722141-89722337) | |
| 211-416, gnl|Mm7|chr8 (89722374-89722169) | |
| 211-416, gnl|monDom2|scaffold_35 (19166639-19166837) | |
| 211-416, gnl|oryCun1|scaffold_204392 (51230-51070) | |
| 211-416, gnl|panTro1|chr18 (46131342-46131540) | |
| 211-416, gnl|rheMac2|chr20 (51744185-51744383) | |
| 211-416, gnl|rn3|chr19 (17044305-17044109) | |
| 211-416, gnl|tetNig1|chr5 (731180-731355) | |
| 211-416, gnl|xenTro1|scaffold_387 (1101424-1101622) | |
| 482-582, gnl|bosTau2|chr18 (21162448-21162348) | |
| 482-582, gnl|canFam2|chr8 (72459481-72459583) | |
| 482-582, gnl|dasNov1|scaffold_3119 (930-1032) | |
| 482-582, gnl|echTel1|scaffold_151725 (895-800) | |
| 482-582, gnl|hg17|chr14 (100753927-100754028) | |
| 482-582, gnl|Hg17|chr16 (52086586-52086486) | |
| 482-582, gnl|loxAfr1|scaffold_3652 (37486-37423) | |
| 482-582, gnl|mm7|chr8 (89719245-89719346) | |
| 482-582, gnl|Mm7|chr8 (89719343-89719243) | |
| 482-582, gnl|monDom2|scaffold_7 (8834993-8834911) | |
| 482-582, gnl|oryCun1|scaffold_204392 (51399-51300) | |
| 482-582, gnl|panTro1|chr15 (101317965-101318066) | |
| 482-582, gnl|rheMac2|chr7 (164508804-164508905) | |
| 482-582, gnl|rn3|chr18 (3780658-3780557) |
| Aligned organism(s): 46 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 94-210, gnl|bosTau2|chr18 (21166183-21166067) | |
| 94-210, gnl|canFam2|chr8 (72459845-72459987) | |
| 94-210, gnl|dasNov1|scaffold_3119 (1306-1422) | |
| 94-210, gnl|echTel1|scaffold_151725 (525-408) | |
| 94-210, gnl|hg17|chr14 (100754288-100754408) | |
| 94-210, gnl|Hg17|chr16 (52091744-52091631) | |
| 94-210, gnl|loxAfr1|scaffold_3652 (33604-33492) | |
| 94-210, gnl|mm7|chr8 (89723611-89723723) | |
| 94-210, gnl|Mm7|chr8 (89723724-89723610) | |
| 94-210, gnl|oryCun1|scaffold_204392 (51031-50918) | |
| 94-210, gnl|panTro1|chr15 (101318321-101318441) | |
| 94-210, gnl|rheMac2|chr7 (164509164-164509284) | |
| 94-210, gnl|rn3|chr18 (3780294-3780188) | |
| 211-416, gnl|bosTau2|chr18 (21164886-21164681) | |
| 211-416, gnl|canFam2|chr2 (65138539-65138344) | |
| 211-416, gnl|danRer3|chr7 (25825588-25825395) | |
| 211-416, gnl|dasNov1|scaffold_71932 (5910-5713) | |
| 211-416, gnl|echTel1|scaffold_310948 (39746-39944) | |
| 211-416, gnl|fr1|chrUn (10502705-10502881) | |
| 211-416, gnl|galGal2|chr11 (4899836-4899658) | |
| 211-416, gnl|hg17|chr16 (52089774-52089972) | |
| 211-416, gnl|Hg17|chr16 (52090009-52089804) | |
| 211-416, gnl|loxAfr1|scaffold_3652 (35013-34820) | |
| 211-416, gnl|mm7|chr8 (89722141-89722337) | |
| 211-416, gnl|Mm7|chr8 (89722374-89722169) | |
| 211-416, gnl|monDom2|scaffold_35 (19166639-19166837) | |
| 211-416, gnl|oryCun1|scaffold_204392 (51230-51070) | |
| 211-416, gnl|panTro1|chr18 (46131342-46131540) | |
| 211-416, gnl|rheMac2|chr20 (51744185-51744383) | |
| 211-416, gnl|rn3|chr19 (17044305-17044109) | |
| 211-416, gnl|tetNig1|chr5 (731180-731355) | |
| 211-416, gnl|xenTro1|scaffold_387 (1101424-1101622) | |
| 482-582, gnl|bosTau2|chr18 (21162448-21162348) | |
| 482-582, gnl|canFam2|chr8 (72459481-72459583) | |
| 482-582, gnl|dasNov1|scaffold_3119 (930-1032) | |
| 482-582, gnl|echTel1|scaffold_151725 (895-800) | |
| 482-582, gnl|hg17|chr14 (100753927-100754028) | |
| 482-582, gnl|Hg17|chr16 (52086586-52086486) | |
| 482-582, gnl|loxAfr1|scaffold_3652 (37486-37423) | |
| 482-582, gnl|mm7|chr8 (89719245-89719346) | |
| 482-582, gnl|Mm7|chr8 (89719343-89719243) | |
| 482-582, gnl|monDom2|scaffold_7 (8834993-8834911) | |
| 482-582, gnl|oryCun1|scaffold_204392 (51399-51300) | |
| 482-582, gnl|panTro1|chr15 (101317965-101318066) | |
| 482-582, gnl|rheMac2|chr7 (164508804-164508905) | |
| 482-582, gnl|rn3|chr18 (3780658-3780557) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ill (0.175593) | |
| ute (0.132784) | |
| eru (0.120048) | |
| pgl (0.118483) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| ute (0.132784) | |
| eru (0.120048) | |
| pgl (0.118483) |