Non-Coding RNA Search

Ss1.1-rill337b_g24.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTTTTATCTCACCAGAATCATTTAATTTGTGAAAAATAAGA
CGACATCAAAGAACTGTGGCCATAACAAGGTGGAAGCCTGAACCTACATCAGCCGTTCTC
GGAGGGCACAGGGTGCTGAGACCTGCCTCCCTGAGACCCAGCTGGCCTGAGTGGGCATGA
AATGGGTCTTCTCCTTGGATTGGCCTGGCGGGGGAGCACCCCTAGGTGCCCGGCTCCCCA
CCCCGGCGGCTGCCCTCTCGGTTCCACATCTCATTCTCCTGCCGAAGCCGCTGGTTCTCC
GTCCGGAGCCTCTCTACTTCGGCGGCCAGCTCCTCCACCTGGCGCCAGGGCTGCCGGCTG
GTGCACCCCTGCAGCTGCTGCAGCCTCCTCGTCTCCTCCTCCGCCTGTGACAGCCGCCTC
TCCAGATCCAGGTAGTCGCGCACCAGCTCTTGCTTGCTGCGGCCCTGCAGGCTCTCGGTG
TGATAGCGCTCGTAGGCCTCGGAGAAGTCCCTCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTTTTATCTCACCAGAATCATTTAATTTGTGAAAAATAAGA
CGACATCAAAGAACTGTGGCCATAACAAGGTGGAAGCCTGAACCTACATCAGCCGTTCTC
GGAGGGCACAGGGTGCTGAGACCTGCCTCCCTGAGACCCAGCTGGCCTGAGTGGGCATGA
AATGGGTCTTCTCCTTGGATTGGCCTGGCGGGGGAGCACCCCTAGGTGCCCGGCTCCCCA
CCCCGGCGGCTGCCCTCTCGGTTCCACATCTCATTCTCCTGCCGAAGCCGCTGGTTCTCC
GTCCGGAGCCTCTCTACTTCGGCGGCCAGCTCCTCCACCTGGCGCCAGGGCTGCCGGCTG
GTGCACCCCTGCAGCTGCTGCAGCCTCCTCGTCTCCTCCTCCGCCTGTGACAGCCGCCTC
TCCAGATCCAGGTAGTCGCGCACCAGCTCTTGCTTGCTGCGGCCCTGCAGGCTCTCGGTG
TGATAGCGCTCGTAGGCCTCGGAGAAGTCCCTCTGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               25-516, gnl|bosTau2|chr19 (37186489-37186981)
               

               
               25-516, gnl|Hg17|chr17 (40603181-40602665)
               

               
               25-516, gnl|Mm7|chr11 (103248229-103247728)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-516, gnl|bosTau2|chr19 (37186489-37186981)
               

               
               25-516, gnl|Hg17|chr17 (40603181-40602665)
               

               
               25-516, gnl|Mm7|chr11 (103248229-103247728)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fcc (0.197785)
               

               
               ill (0.175593)
               

               
               nca (0.136874)
               

               
               cly (0.120642)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               ill (0.175593)
               

               
               nca (0.136874)
               

               
               cly (0.120642)

	25-516, gnl\|bosTau2\|chr19 (37186489-37186981)
	25-516, gnl\|Hg17\|chr17 (40603181-40602665)
	25-516, gnl\|Mm7\|chr11 (103248229-103247728)