Ss1.1-rill337b_k6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATATGGCTGCAGGTCATCTGTCAGAAGCATGGTCCCGGGTGACAAAAAATGCCATTGCA GAAACCATCATTGCCTTGACCAAGATGGAGGAAGAATTTAGATCTCCGGTGAGATGCATT GCAACTACTAGGCTCTGGCTTGCTCTGGCATCACTGTGCGTTCTTGACCAGGACCACGTA GATCGTCTGTCGTCCGGGAGATGGATGGGAAAGGATGGACAACAAAAACAAATGCCCATG TGTGATAACCATGATGACGGTGAAACTGCAGCAATCATTTTATGCAATGTATGTGGAAAC TTATGTACTGACTGTGACAGATTCCTTCATCTTCATCGGCGAACCAAAACTCATCAAAGA CAGGTCTTCAAAGAAGAAGAAGAGGCCATAAAGGTTGACCTTCATGAAGGTTGTGGTAGA ACCAAGTTGTTCTGGTTGATGGCACTGGCAGATTCTAAGACAATGAAGGCAATGGTGGAA TTCCGAGAACACACAGGCAAACCCACCACAAGTAGCTCAGAAGCGTGCCGTTTCTGTGGC TCCAGGAGTGGAACGGAGTTGTCGGCTGTGGGCAGTGTTTGTTCAGATGCAGATTGCCAG GAATATGCTAAGATAGCCTGTAGTAAGACGCATCCTTGTGGCCATCCATGTGGAGGCGTT AAAAACGAAGAGCACTGTCTGCCCTGCCTACACGGCTGTGATAAAAACGCCTCGACTCTG AAGCAAGACGCTGACGACATGTGCATGATCTGTTTCACCGAAGCGCTCTCAGCAGCACCT GCCATTCAGCTGGATTGTAGTCACGTATTCCACTTACAGTGCTGTCGACGAGTTTTGGAA GGGGATGGCTTGGACCAAGGATAACATTTGGATTTATATCTTGTCCTATTTGCAAGAACA AAATAAACCATACAGTGTTAAAAGATCTGCTTGATCCAATAAAAGAACTCTATGAGGATG TCAGAAGAAAAGCTCTAATGAGATTGGAATATGAAGGTCTGCATAAGAGCGAAGCCATCA CCACTCCTGGTGTGAGGTTTTATAATGACCCTGCTGGCTATGCCATGAATAGATATGCAT ATTATGTCTGCTACAAATGCAGAAAGGCTTATTTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATATGGCTGCAGGTCATCTGTCAGAAGCATGGTCCCGGGTGACAAAAAATGCCATTGCA GAAACCATCATTGCCTTGACCAAGATGGAGGAAGAATTTAGATCTCCGGTGAGATGCATT GCAACTACTAGGCTCTGGCTTGCTCTGGCATCACTGTGCGTTCTTGACCAGGACCACGTA GATCGTCTGTCGTCCGGGAGATGGATGGGAAAGGATGGACAACAAAAACAAATGCCCATG TGTGATAACCATGATGACGGTGAAACTGCAGCAATCATTTTATGCAATGTATGTGGAAAC TTATGTACTGACTGTGACAGATTCCTTCATCTTCATCGGCGAACCAAAACTCATCAAAGA CAGGTCTTCAAAGAAGAAGAAGAGGCCATAAAGGTTGACCTTCATGAAGGTTGTGGTAGA ACCAAGTTGTTCTGGTTGATGGCACTGGCAGATTCTAAGACAATGAAGGCAATGGTGGAA TTCCGAGAACACACAGGCAAACCCACCACAAGTAGCTCAGAAGCGTGCCGTTTCTGTGGC TCCAGGAGTGGAACGGAGTTGTCGGCTGTGGGCAGTGTTTGTTCAGATGCAGATTGCCAG GAATATGCTAAGATAGCCTGTAGTAAGACGCATCCTTGTGGCCATCCATGTGGAGGCGTT AAAAACGAAGAGCACTGTCTGCCCTGCCTACACGGCTGTGATAAAAACGCCTCGACTCTG AAGCAAGACGCTGACGACATGTGCATGATCTGTTTCACCGAAGCGCTCTCAGCAGCACCT GCCATTCAGCTGGATTGTAGTCACGTATTCCACTTACAGTGCTGTCGACGAGTTTTGGAA GGGGATGGCTTGGACCAAGGATAACATTTGGATTTATATCTTGTCCTATTTGCAAGAACA AAATAAACCATACAGTGTTAAAAGATCTGCTTGATCCAATAAAAGAACTCTATGAGGATG TCAGAAGAAAAGCTCTAATGAGATTGGAATATGAAGGTCTGCATAAGAGCGAAGCCATCA CCACTCCTGGTGTGAGGTTTTATAATGACCCTGCTGGCTATGCCATGAATAGATATGCAT ATTATGTCTGCTACAAATGCAGAAAGGCTTATTTTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
| 13-132, gnl|bosTau2|chr12 (26151091-26151210) | |
| 13-132, gnl|canFam2|chr22 (33579472-33579626) | |
| 13-132, gnl|danRer3|chr7 (47409449-47409584) | |
| 13-132, gnl|dasNov1|scaffold_19199 (42137-41983) | |
| 13-132, gnl|fr1|chrUn (155223979-155224130) | |
| 13-132, gnl|galGal2|chr1 (151131501-151131345) | |
| 13-132, gnl|hg17|chr13 (76536748-76536902) | |
| 13-132, gnl|Hg17|chr13 (76536870-76536751) | |
| 13-132, gnl|loxAfr1|scaffold_10956 (12675-12517) | |
| 13-132, gnl|mm7|chr14 (97562405-97562559) | |
| 13-132, gnl|Mm7|chr14 (97562527-97562408) | |
| 13-132, gnl|monDom2|scaffold_8 (14673493-14673658) | |
| 13-132, gnl|oryCun1|scaffold_207466 (37133-37287) | |
| 13-132, gnl|panTro1|chr14 (59113101-59113255) | |
| 13-132, gnl|rheMac2|chr17 (57552999-57553153) | |
| 13-132, gnl|rn3|chr15 (87154518-87154672) | |
| 13-132, gnl|tetNig1|chr2 (8188060-8188201) | |
| 13-132, gnl|xenTro1|scaffold_141 (1871261-1871093) | |
| 234-365, gnl|bosTau2|chr12 (26154002-26154133) | |
| 234-365, gnl|canFam2|chr22 (33576968-33577114) | |
| 234-365, gnl|danRer3|chr7 (47394929-47395080) | |
| 234-365, gnl|echTel1|scaffold_284463 (2640-2494) | |
| 234-365, gnl|fr1|chrUn (155223560-155223702) | |
| 234-365, gnl|galGal2|chr1 (151138123-151137979) | |
| 234-365, gnl|hg17|chr13 (76533792-76533938) | |
| 234-365, gnl|Hg17|chr13 (76533927-76533796) | |
| 234-365, gnl|loxAfr1|scaffold_10956 (16176-16030) | |
| 234-365, gnl|mm7|chr14 (97559537-97559681) | |
| 234-365, gnl|Mm7|chr14 (97559670-97559539) | |
| 234-365, gnl|monDom2|scaffold_8 (14667270-14667413) | |
| 234-365, gnl|oryCun1|scaffold_207466 (33885-34032) | |
| 234-365, gnl|panTro1|chr14 (59110150-59110296) | |
| 234-365, gnl|rheMac2|chr17 (57550023-57550169) | |
| 234-365, gnl|rn3|chr15 (87152110-87152254) | |
| 234-365, gnl|tetNig1|chr2 (8187587-8187722) | |
| 234-365, gnl|xenTro1|scaffold_141 (1873628-1873491) | |
| 598-798, gnl|bosTau2|chr12 (26156986-26157186) | |
| 598-798, gnl|canFam2|chr22 (33574037-33574271) | |
| 598-798, gnl|danRer3|chr7 (47392657-47392862) | |
| 598-798, gnl|echTel1|scaffold_284463 (6228-5996) | |
| 598-798, gnl|fr1|chrUn (155222702-155222920) | |
| 598-798, gnl|galGal2|chr1 (151141695-151141468) | |
| 598-798, gnl|hg17|chr13 (76530324-76530558) | |
| 598-798, gnl|Hg17|chr13 (76530545-76530345) | |
| 598-798, gnl|loxAfr1|scaffold_10956 (19337-19100) | |
| 598-798, gnl|mm7|chr14 (97555767-97555993) | |
| 598-798, gnl|Mm7|chr14 (97555980-97555780) | |
| 598-798, gnl|monDom2|scaffold_8 (14664562-14664784) | |
| 598-798, gnl|panTro1|chr14 (59106676-59106910) | |
| 598-798, gnl|rheMac2|chr17 (57546502-57546736) | |
| 598-798, gnl|rn3|chr15 (87149535-87149761) | |
| 598-798, gnl|tetNig1|chr2 (8186703-8186928) | |
| 598-798, gnl|xenTro1|scaffold_141 (1875073-1874852) | |
| 874-1107, gnl|bosTau2|chr12 (26159170-26159402) | |
| 874-1107, gnl|Hg17|chr13 (76527920-76527693) | |
| 874-1107, gnl|Mm7|chr14 (97553206-97552981) |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-132, gnl|bosTau2|chr12 (26151091-26151210) | |
| 13-132, gnl|canFam2|chr22 (33579472-33579626) | |
| 13-132, gnl|danRer3|chr7 (47409449-47409584) | |
| 13-132, gnl|dasNov1|scaffold_19199 (42137-41983) | |
| 13-132, gnl|fr1|chrUn (155223979-155224130) | |
| 13-132, gnl|galGal2|chr1 (151131501-151131345) | |
| 13-132, gnl|hg17|chr13 (76536748-76536902) | |
| 13-132, gnl|Hg17|chr13 (76536870-76536751) | |
| 13-132, gnl|loxAfr1|scaffold_10956 (12675-12517) | |
| 13-132, gnl|mm7|chr14 (97562405-97562559) | |
| 13-132, gnl|Mm7|chr14 (97562527-97562408) | |
| 13-132, gnl|monDom2|scaffold_8 (14673493-14673658) | |
| 13-132, gnl|oryCun1|scaffold_207466 (37133-37287) | |
| 13-132, gnl|panTro1|chr14 (59113101-59113255) | |
| 13-132, gnl|rheMac2|chr17 (57552999-57553153) | |
| 13-132, gnl|rn3|chr15 (87154518-87154672) | |
| 13-132, gnl|tetNig1|chr2 (8188060-8188201) | |
| 13-132, gnl|xenTro1|scaffold_141 (1871261-1871093) | |
| 234-365, gnl|bosTau2|chr12 (26154002-26154133) | |
| 234-365, gnl|canFam2|chr22 (33576968-33577114) | |
| 234-365, gnl|danRer3|chr7 (47394929-47395080) | |
| 234-365, gnl|echTel1|scaffold_284463 (2640-2494) | |
| 234-365, gnl|fr1|chrUn (155223560-155223702) | |
| 234-365, gnl|galGal2|chr1 (151138123-151137979) | |
| 234-365, gnl|hg17|chr13 (76533792-76533938) | |
| 234-365, gnl|Hg17|chr13 (76533927-76533796) | |
| 234-365, gnl|loxAfr1|scaffold_10956 (16176-16030) | |
| 234-365, gnl|mm7|chr14 (97559537-97559681) | |
| 234-365, gnl|Mm7|chr14 (97559670-97559539) | |
| 234-365, gnl|monDom2|scaffold_8 (14667270-14667413) | |
| 234-365, gnl|oryCun1|scaffold_207466 (33885-34032) | |
| 234-365, gnl|panTro1|chr14 (59110150-59110296) | |
| 234-365, gnl|rheMac2|chr17 (57550023-57550169) | |
| 234-365, gnl|rn3|chr15 (87152110-87152254) | |
| 234-365, gnl|tetNig1|chr2 (8187587-8187722) | |
| 234-365, gnl|xenTro1|scaffold_141 (1873628-1873491) | |
| 598-798, gnl|bosTau2|chr12 (26156986-26157186) | |
| 598-798, gnl|canFam2|chr22 (33574037-33574271) | |
| 598-798, gnl|danRer3|chr7 (47392657-47392862) | |
| 598-798, gnl|echTel1|scaffold_284463 (6228-5996) | |
| 598-798, gnl|fr1|chrUn (155222702-155222920) | |
| 598-798, gnl|galGal2|chr1 (151141695-151141468) | |
| 598-798, gnl|hg17|chr13 (76530324-76530558) | |
| 598-798, gnl|Hg17|chr13 (76530545-76530345) | |
| 598-798, gnl|loxAfr1|scaffold_10956 (19337-19100) | |
| 598-798, gnl|mm7|chr14 (97555767-97555993) | |
| 598-798, gnl|Mm7|chr14 (97555980-97555780) | |
| 598-798, gnl|monDom2|scaffold_8 (14664562-14664784) | |
| 598-798, gnl|panTro1|chr14 (59106676-59106910) | |
| 598-798, gnl|rheMac2|chr17 (57546502-57546736) | |
| 598-798, gnl|rn3|chr15 (87149535-87149761) | |
| 598-798, gnl|tetNig1|chr2 (8186703-8186928) | |
| 598-798, gnl|xenTro1|scaffold_141 (1875073-1874852) | |
| 874-1107, gnl|bosTau2|chr12 (26159170-26159402) | |
| 874-1107, gnl|Hg17|chr13 (76527920-76527693) | |
| 874-1107, gnl|Mm7|chr14 (97553206-97552981) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| cbl (0.114797) |