Non-Coding RNA Search

Ss1.1-rill338b_f19.5

Sequence:


               
               TTGAGTTCTTTAAACTCAAAATGTGCCCGCCATCCCTGGGCTGCCATGTGATTCCACAAA
GCAATAGATTCTCCCCAGAGCCATAGTGGTGAAATGATGCAAACAAGTCCTTCCTTTCCA
GGGCTCACACTAGGGTCCCATTCTTGCTGTCATAGCGGGGTTTGGCCTGTGGGAAGTGAA
GGATCGCATACTCTGTAGCATTTTCCAACTGCAGGTGCTTCATCTCCTGGGCCGAGCGTG
GCTGGGTTCTGCTGCATACTTGAATGTCTGCGTAATGTAAGCTGCTTTCCTCCAACCTGA
GGCCTTGACTCCTCCGCTGAGGCGCAGGCTGCTTTAACACCTGCTCATGTGTACGTCTCC
TTATGTCGTGGCCCTTTAAGCCATTCTGTCTCAGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCTGCTGCTTCAATGTCC
ATCTTGCTTGGCTCCCCATTTTCTTTTTCCTCTGGAAAGTTGATGGGCAGCTCCAGCTTC
CCCCGCAGCAGAGCCGGTTTCCCATGCTGCTCTGTCTCCCTGGGAGCCCAGCTGTTTTTG
AACAGAAAGAGGCTTGTGCATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAGTTCTTTAAACTCAAAATGTGCCCGCCATCCCTGGGCTGCCATGTGATTCCACAAA
GCAATAGATTCTCCCCAGAGCCATAGTGGTGAAATGATGCAAACAAGTCCTTCCTTTCCA
GGGCTCACACTAGGGTCCCATTCTTGCTGTCATAGCGGGGTTTGGCCTGTGGGAAGTGAA
GGATCGCATACTCTGTAGCATTTTCCAACTGCAGGTGCTTCATCTCCTGGGCCGAGCGTG
GCTGGGTTCTGCTGCATACTTGAATGTCTGCGTAATGTAAGCTGCTTTCCTCCAACCTGA
GGCCTTGACTCCTCCGCTGAGGCGCAGGCTGCTTTAACACCTGCTCATGTGTACGTCTCC
TTATGTCGTGGCCCTTTAAGCCATTCTGTCTCAGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCTGCTGCTTCAATGTCC
ATCTTGCTTGGCTCCCCATTTTCTTTTTCCTCTGGAAAGTTGATGGGCAGCTCCAGCTTC
CCCCGCAGCAGAGCCGGTTTCCCATGCTGCTCTGTCTCCCTGGGAGCCCAGCTGTTTTTG
AACAGAAAGAGGCTTGTGCATTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               73-375, gnl|bosTau2|chr15 (8337826-8338132)
               

               
               73-375, gnl|Hg17|chr11 (111302202-111301892)
               

               
               73-375, gnl|Mm7|chr9 (50719016-50719333)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               73-375, gnl|bosTau2|chr15 (8337826-8338132)
               

               
               73-375, gnl|Hg17|chr11 (111302202-111301892)
               

               
               73-375, gnl|Mm7|chr9 (50719016-50719333)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ill (0.175593)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	73-375, gnl\|bosTau2\|chr15 (8337826-8338132)
	73-375, gnl\|Hg17\|chr11 (111302202-111301892)
	73-375, gnl\|Mm7\|chr9 (50719016-50719333)