Non-Coding RNA Search

Ss1.1-rill340b_g24.5

Sequence:


               
               AAGAACTAGAATCTGCTCTAGAAGAGGATGTTGAGGATTTCCCAACTTTTGGAGACTCCC
AGAGTGACTATGATACGGTAGTCCATCCTTTCTACGCTTACTGGCAGAGTTTCTGCACGC
AGAAGAACTTTGCTTGGAAAGAAGAATATGATACCCGACAAGCTTCAAACCGCTGGGAGA
AACGAGCCATGGAGAAAGAGAACAAAAAGATTCGAGACAAAGCGAGGAAAGAGAAGAATG
AGCTTGTCCGTCAGCTGGTAGCTTTCATCCGCAAAAGAGATAGAAGAGTGCAGGCCCATC
GGAAACTGGTGGAAGAACAGAACGCAGAGAAGGCGAGGAAGGCCGAGGCCATGAGACGGC
AGCAGAAGCTCAAGCAGGCCAAGTATGTGGTGCTGGCTGGACCCTGTCTAGATGTAGGTG
CGGGTCACAGGAAGCGTCAGTGGATGCCTGGCGTGGTGCTTTCCTCATCCTGGCTTCGTC
CTTCTCTACATCCTGGCGTTGGACCGTGTCTTTTCATCTACTGTGAAAAAATGTTTCCTT
TGAGTTGGATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAACTAGAATCTGCTCTAGAAGAGGATGTTGAGGATTTCCCAACTTTTGGAGACTCCC
AGAGTGACTATGATACGGTAGTCCATCCTTTCTACGCTTACTGGCAGAGTTTCTGCACGC
AGAAGAACTTTGCTTGGAAAGAAGAATATGATACCCGACAAGCTTCAAACCGCTGGGAGA
AACGAGCCATGGAGAAAGAGAACAAAAAGATTCGAGACAAAGCGAGGAAAGAGAAGAATG
AGCTTGTCCGTCAGCTGGTAGCTTTCATCCGCAAAAGAGATAGAAGAGTGCAGGCCCATC
GGAAACTGGTGGAAGAACAGAACGCAGAGAAGGCGAGGAAGGCCGAGGCCATGAGACGGC
AGCAGAAGCTCAAGCAGGCCAAGTATGTGGTGCTGGCTGGACCCTGTCTAGATGTAGGTG
CGGGTCACAGGAAGCGTCAGTGGATGCCTGGCGTGGTGCTTTCCTCATCCTGGCTTCGTC
CTTCTCTACATCCTGGCGTTGGACCGTGTCTTTTCATCTACTGTGAAAAAATGTTTCCTT
TGAGTTGGATGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               77-552, gnl|bosTau2|chr19 (28046220-28045730)
               

               
               77-552, gnl|Hg17|chr5 (34973187-34973984)
               

               
               77-552, gnl|Mm7|chr15 (10523075-10522560)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               77-552, gnl|bosTau2|chr19 (28046220-28045730)
               

               
               77-552, gnl|Hg17|chr5 (34973187-34973984)
               

               
               77-552, gnl|Mm7|chr15 (10523075-10522560)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               tes (0.415628)
               

               
               ill (0.175593)
               

               
               fbs (0.175346)
               

               
               cst (0.140036)
               

               
               eru (0.120048)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.415628)
               

               
               ill (0.175593)
               

               
               fbs (0.175346)
               

               
               cst (0.140036)
               

               
               eru (0.120048)

	77-552, gnl\|bosTau2\|chr19 (28046220-28045730)
	77-552, gnl\|Hg17\|chr5 (34973187-34973984)
	77-552, gnl\|Mm7\|chr15 (10523075-10522560)

	tes (0.415628)
	ill (0.175593)
	fbs (0.175346)
	cst (0.140036)
	eru (0.120048)