Non-Coding RNA Search

Ss1.1-risp04_n24.5

Sequence:


               
               ACTCTGGCAAAATGCCCATCACTCCTAAGCATATGATACCTGGTCCATTTTCATATATGT
GTGACTCTCCTGGCCCCTGGAAACATCTGAATTTATGATGCCTGCTAAGGATGGTCCGTC
ATCAACTTGATGTAAGATTTCTATGTGCAGACTTTTCCATAAGCTAGTGAAGCAGAGAAT
TACCTCAAAATAAGCCAGGAAATTTTGTGATATCAGACTCAGAAGCAATGGAGTAGAAGA
GCAAGAAAAGGATGCTAAAAAGGCAATGACTACCAAATACATCTACCCTACCAAAATGTA
GACGTATTATATCCCCAGCATCTAGAAATGAGGCTGGGACAGAGTAAATGCTCATCAAAT
GTTCATTAGGTAAAGGAACAGAATCTCAATAGTGCCTAATCATACTTCCTAAGTAGCAAG
AAGAATCAGGAGCTGTTACCCCTCGCTCACACGGCAAATCCATATAATCCTTCTTTTTTG
TTTGTTTCTCTTGGTTTTTCCTCCTTCATACCATTTTCCTCTGCGTCTTTTCTCTATTTC
TCCACATTCAACGGCTTCCCAACCCCACTCTCAATAACATAAAAAACTGGATTAAAAGTT
AAAATGCTCTTTTGCTATTGAATATATATATAATGTATATAAAGTCTTCCTTAAAAAACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCTGGCAAAATGCCCATCACTCCTAAGCATATGATACCTGGTCCATTTTCATATATGT
GTGACTCTCCTGGCCCCTGGAAACATCTGAATTTATGATGCCTGCTAAGGATGGTCCGTC
ATCAACTTGATGTAAGATTTCTATGTGCAGACTTTTCCATAAGCTAGTGAAGCAGAGAAT
TACCTCAAAATAAGCCAGGAAATTTTGTGATATCAGACTCAGAAGCAATGGAGTAGAAGA
GCAAGAAAAGGATGCTAAAAAGGCAATGACTACCAAATACATCTACCCTACCAAAATGTA
GACGTATTATATCCCCAGCATCTAGAAATGAGGCTGGGACAGAGTAAATGCTCATCAAAT
GTTCATTAGGTAAAGGAACAGAATCTCAATAGTGCCTAATCATACTTCCTAAGTAGCAAG
AAGAATCAGGAGCTGTTACCCCTCGCTCACACGGCAAATCCATATAATCCTTCTTTTTTG
TTTGTTTCTCTTGGTTTTTCCTCCTTCATACCATTTTCCTCTGCGTCTTTTCTCTATTTC
TCCACATTCAACGGCTTCCCAACCCCACTCTCAATAACATAAAAAACTGGATTAAAAGTT
AAAATGCTCTTTTGCTATTGAATATATATATAATGTATATAAAGTCTTCCTTAAAAAACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-660, gnl|bosTau2|chr27 (9430120-9430784)
               

               
               5-660, gnl|Hg17|chr4 (186809778-186809056)
               

               
               5-660, gnl|Mm7|chr8 (44687894-44688482)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-660, gnl|bosTau2|chr27 (9430120-9430784)
               

               
               5-660, gnl|Hg17|chr4 (186809778-186809056)
               

               
               5-660, gnl|Mm7|chr8 (44687894-44688482)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               isp (0.150376)
               

               
               bfe (0.149858)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.150376)
               

               
               bfe (0.149858)

	5-660, gnl\|bosTau2\|chr27 (9430120-9430784)
	5-660, gnl\|Hg17\|chr4 (186809778-186809056)
	5-660, gnl\|Mm7\|chr8 (44687894-44688482)