Non-Coding RNA Search

Ss1.1-risp06_a10.5

Sequence:


               
               TTACACAGACTATAGAATTTGCCACGAAAATCATGGTAGGACTGGGAACCACCACAAGTC
TGAGTAGAGTTCTTACGCACATCATGAGCATAGATATATCTCCAACTTGGGACTAATGTG
CTGCTTTCTCTCCATCCCATGGCATTCCATCTTCTTTAAATTCTGCACTTGTTTTACAAA
CACAGCTAATTTCTTCCTTTTCCAAACTTTATTCTTACCTAGCAAAAGAATTGCAAACCA
GAGCATTTACCAAAGTTAACCTTGATTCAGACACTAAAAGTATTAGAACACTCAAAGAGT
CCCAAATTAAAACAACCCATGAAGTAAAGAGAGAATCATCAAAGAAATCATCAAGTTTGT
CATTAACTTCGTGCTAAAGAACCCAAGGAACTGAGAAGCCAAGGCGTCAAGCACACTGAC
TTGTGTCACGTGGACCGGACATTGAGTGGTACCCAGGCTTCCTCCAGAAGGTCCCCAGAA
ATGATTGTGTCTAAAGGCTGTATCTTTTCCTTATGTAATAAAATCAATTTTGAATTGAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGCCTCGTGCCGAATTCGGCACGAGGCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACACAGACTATAGAATTTGCCACGAAAATCATGGTAGGACTGGGAACCACCACAAGTC
TGAGTAGAGTTCTTACGCACATCATGAGCATAGATATATCTCCAACTTGGGACTAATGTG
CTGCTTTCTCTCCATCCCATGGCATTCCATCTTCTTTAAATTCTGCACTTGTTTTACAAA
CACAGCTAATTTCTTCCTTTTCCAAACTTTATTCTTACCTAGCAAAAGAATTGCAAACCA
GAGCATTTACCAAAGTTAACCTTGATTCAGACACTAAAAGTATTAGAACACTCAAAGAGT
CCCAAATTAAAACAACCCATGAAGTAAAGAGAGAATCATCAAAGAAATCATCAAGTTTGT
CATTAACTTCGTGCTAAAGAACCCAAGGAACTGAGAAGCCAAGGCGTCAAGCACACTGAC
TTGTGTCACGTGGACCGGACATTGAGTGGTACCCAGGCTTCCTCCAGAAGGTCCCCAGAA
ATGATTGTGTCTAAAGGCTGTATCTTTTCCTTATGTAATAAAATCAATTTTGAATTGAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGCCTCGTGCCGAATTCGGCACGAGGCTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-538, gnl|bosTau2|chr2 (7657688-7658237)
               

               
               1-538, gnl|Hg17|chr2 (179444482-179443922)
               

               
               1-538, gnl|Mm7|chr2 (76766522-76765796)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-538, gnl|bosTau2|chr2 (7657688-7658237)
               

               
               1-538, gnl|Hg17|chr2 (179444482-179443922)
               

               
               1-538, gnl|Mm7|chr2 (76766522-76765796)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               isp (0.150376)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.150376)
               

               
               ldo (0.0970026)

	1-538, gnl\|bosTau2\|chr2 (7657688-7658237)
	1-538, gnl\|Hg17\|chr2 (179444482-179443922)
	1-538, gnl\|Mm7\|chr2 (76766522-76765796)