Ss1.1-risp10_b1.5
|
GGCGAAACATGGCGGGACCAAGTCTTAGCCTCAGGAGACGGGGCGTTTCAGGGACTCCGC
TCCCGCCACGGGTTCAGCATTCTGCCACACCTCGACGGGACTTCCTCGCCAAGGAGGAAG
AATATAAGCGTTTAAATGCAGAATTAGAGGCAAAAACTGCTGATCTGGTTCGACAAGCTG
AGGAAGTAATAAGAGATCAGCAAGAAGTACGATCTAGGTCTTTTCCAACACAAATCAAAT
CATATGAAGAGGAAGATGATAACAGCTTAAGAGGTCCATTATCATCTGAAGGGACAGTTC
ATTTACATTTAGAAACTAAGCCAAATAACAAAAATGTTGATCCACTAAACAAAGTTCAAA
ACAAACTGCACTCCGCAAGTAAAGGAAGAAAAACAAATTTAAGTGTAAAATTGAAATACT
CTGATGTACGAACTGCCAATGATGTTGCCATTCCAGAGGATTTCTCAGACTTTTCTCTTG
CAAAAACAATTAGCAAAATTGAAGGGCAACTGGAGGAAGAAGGCTTACCAGATTATATAG
ATGATGATATTTTTTGTGGTGTTAGTAAAGACATTGGATCTGAAGCACAGATCAGATTTT
TGAAGGCCAAACTCCGTGTTATGCAAGAGGAATTGGATAATGTTGTATGTGAATGCAATA
AAAAGGAGGATGAAATTCAGGATTTAAAGTCTCAACTGAAAAATTTTGAAGAAGATTGTG
TGAAACAGCAGCGAACAATTAATTTGCAGCAGTCTCAAATAGAAAAGTATAAAACTCTTT
TCGAAGAAGCAAACCAAAAATGTGATGGATTACAGCAACAGTTGTCTTCAGTAGAAAGGG
AATTAGAAAATAAAAGAAGACTGCAAAAACAGGCTGCCACAAGTCAAAGTGCCATGGAAG
TTCGCTTGAATAGAGCTCTAGAAGAAGCAGAAAAGTATAAACTGGAGTTAAGTAAACTAA
AGCAGAACAACAAGGATATAGCAAATGAAGAACACAAAAAAATCGAAGTGTTAAAATCAG
AAAACAAGAAGCTAGAAAAGCAAAAAGGAGAATTAATGATAGGGTTCAAGAAACAATTAA
AATTAATTGATGTTTTAAAAAGGCAGAAGATGCATATTGAAGCTGCCAGGATGCTGTCTT
TCACCGAAGAGGAATTCATGAAGGCACTTGAATGGGGAAATGGATAAGTGATTGACTTTT
TAACCTAAAGTGCATGGTATATAAAGTGCAAAACATACTCTTTAACTTAAGTCATAATAG
TTTGAATTGCCTTTATAGGTAATGAAGATATTCAATAACAAAATCAAAATAATTCCAAAT
TCCCTATTTAGATTTGGGGATATAAAGTTGATAGCTAATTATCAGAAAATAGAAATATTT
TGTAAAATAAAGCAATAGGAATCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCGAAACATGGCGGGACCAAGTCTTAGCCTCAGGAGACGGGGCGTTTCAGGGACTCCGC
TCCCGCCACGGGTTCAGCATTCTGCCACACCTCGACGGGACTTCCTCGCCAAGGAGGAAG
AATATAAGCGTTTAAATGCAGAATTAGAGGCAAAAACTGCTGATCTGGTTCGACAAGCTG
AGGAAGTAATAAGAGATCAGCAAGAAGTACGATCTAGGTCTTTTCCAACACAAATCAAAT
CATATGAAGAGGAAGATGATAACAGCTTAAGAGGTCCATTATCATCTGAAGGGACAGTTC
ATTTACATTTAGAAACTAAGCCAAATAACAAAAATGTTGATCCACTAAACAAAGTTCAAA
ACAAACTGCACTCCGCAAGTAAAGGAAGAAAAACAAATTTAAGTGTAAAATTGAAATACT
CTGATGTACGAACTGCCAATGATGTTGCCATTCCAGAGGATTTCTCAGACTTTTCTCTTG
CAAAAACAATTAGCAAAATTGAAGGGCAACTGGAGGAAGAAGGCTTACCAGATTATATAG
ATGATGATATTTTTTGTGGTGTTAGTAAAGACATTGGATCTGAAGCACAGATCAGATTTT
TGAAGGCCAAACTCCGTGTTATGCAAGAGGAATTGGATAATGTTGTATGTGAATGCAATA
AAAAGGAGGATGAAATTCAGGATTTAAAGTCTCAACTGAAAAATTTTGAAGAAGATTGTG
TGAAACAGCAGCGAACAATTAATTTGCAGCAGTCTCAAATAGAAAAGTATAAAACTCTTT
TCGAAGAAGCAAACCAAAAATGTGATGGATTACAGCAACAGTTGTCTTCAGTAGAAAGGG
AATTAGAAAATAAAAGAAGACTGCAAAAACAGGCTGCCACAAGTCAAAGTGCCATGGAAG
TTCGCTTGAATAGAGCTCTAGAAGAAGCAGAAAAGTATAAACTGGAGTTAAGTAAACTAA
AGCAGAACAACAAGGATATAGCAAATGAAGAACACAAAAAAATCGAAGTGTTAAAATCAG
AAAACAAGAAGCTAGAAAAGCAAAAAGGAGAATTAATGATAGGGTTCAAGAAACAATTAA
AATTAATTGATGTTTTAAAAAGGCAGAAGATGCATATTGAAGCTGCCAGGATGCTGTCTT
TCACCGAAGAGGAATTCATGAAGGCACTTGAATGGGGAAATGGATAAGTGATTGACTTTT
TAACCTAAAGTGCATGGTATATAAAGTGCAAAACATACTCTTTAACTTAAGTCATAATAG
TTTGAATTGCCTTTATAGGTAATGAAGATATTCAATAACAAAATCAAAATAATTCCAAAT
TCCCTATTTAGATTTGGGGATATAAAGTTGATAGCTAATTATCAGAAAATAGAAATATTT
TGTAAAATAAAGCAATAGGAATCT
|
|
gi|20380883|gb|AAH28119.1| |
Protein identifier
|
gi|20380883|gb|AAH28119.1| |
|
664-845, gnl|bosTau2|chr10 (39768437-39768618) |
|
664-845, gnl|canFam2|chr30 (24605138-24605326) |
|
664-845, gnl|danRer3|chrUn (78788818-78788641) |
|
664-845, gnl|echTel1|scaffold_170931 (6193-6381) |
|
664-845, gnl|galGal2|chrUn (15251007-15251196) |
|
664-845, gnl|hg17|chr15 (54474139-54474327) |
|
664-845, gnl|Hg17|chr15 (54474149-54474330) |
|
664-845, gnl|mm7|chr9 (72510716-72510527) |
|
664-845, gnl|Mm7|chr9 (72510703-72510522) |
|
664-845, gnl|monDom2|scaffold_12 (33956777-33956965) |
|
664-845, gnl|oryCun1|scaffold_194470 (4731-4542) |
|
664-845, gnl|panTro1|chr16 (54822560-54822748) |
|
664-845, gnl|rheMac2|chr7 (34735738-34735926) |
|
664-845, gnl|rn3|chr8 (77081151-77080962) |
|
664-845, gnl|tetNig1|chr5 (5320031-5320208) |
|
664-845, gnl|xenTro1|scaffold_685 (336400-336588) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
664-845, gnl|bosTau2|chr10 (39768437-39768618) |
|
664-845, gnl|canFam2|chr30 (24605138-24605326) |
|
664-845, gnl|danRer3|chrUn (78788818-78788641) |
|
664-845, gnl|echTel1|scaffold_170931 (6193-6381) |
|
664-845, gnl|galGal2|chrUn (15251007-15251196) |
|
664-845, gnl|hg17|chr15 (54474139-54474327) |
|
664-845, gnl|Hg17|chr15 (54474149-54474330) |
|
664-845, gnl|mm7|chr9 (72510716-72510527) |
|
664-845, gnl|Mm7|chr9 (72510703-72510522) |
|
664-845, gnl|monDom2|scaffold_12 (33956777-33956965) |
|
664-845, gnl|oryCun1|scaffold_194470 (4731-4542) |
|
664-845, gnl|panTro1|chr16 (54822560-54822748) |
|
664-845, gnl|rheMac2|chr7 (34735738-34735926) |
|
664-845, gnl|rn3|chr8 (77081151-77080962) |
|
664-845, gnl|tetNig1|chr5 (5320031-5320208) |
|
664-845, gnl|xenTro1|scaffold_685 (336400-336588) |
|
isp (0.902256) |
|
bfe (0.449573) |
|
fco (0.314416) |
|
tbr (0.308356) |
|
cte (0.29274) |
|
ste (0.270416) |
|
tes (0.207814) |
|
ill (0.175593) |
|
ova (0.129132) |
|
spc (0.113366) |
|
cty (0.10408) |
|
ldo (0.0970026) |
|
isp (0.902256) |
|
bfe (0.449573) |
|
fco (0.314416) |
|
tbr (0.308356) |
|
cte (0.29274) |
|
ste (0.270416) |
|
tes (0.207814) |
|
ill (0.175593) |
|
ova (0.129132) |
|
spc (0.113366) |
|
cty (0.10408) |
|
ldo (0.0970026) |
