Non-Coding RNA Search

Ss1.1-risp13_o6.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTACTTTAATTAAATTTATTGAAGTACAATATATATACAGTAA
ATTCACCGCTTTTAATCTACAGTTCTGTGAGTTTTGACAATAATGTGACCATTACCACAC
TCAAGATATAGAACAGTTCTATCACCCAAAACATTATCTCATGTCTCTTCGTGGTCAATC
TTTGCCCCAACCCCTTAATCAATTCTCTTCCCTATGGTTTTGCCTTTTCCAGAATGTCAT
ATAAGCCTTTGTAGTGTAGGTTCTTTTTCTTACCATAATACATTTTAGATTCATACATTG
TGTGTCTATCAGAAGTTTGTTCCTTTTTATTGCTGAGTAGTATTCCATTACCTGGATGTA
TCCCAGTTTGTTTACATAGAAATGAAAGACATTTGACTTACGTCCAGTTTTTGGCAGTTG
TGAATAAACCTTCTCTATATATTCACATACAGGTTTTTGTGTAACGTTGAGTTTTCATTT
CTCTTGGGTGGCGATCATGCTGGGTAGTACAATAAATCTATTTTAACATTATAAGAAATT
TCCAAACACGTGTCTGCACCATATTTTATCCTCTCTCAGCGATACACGCAAGTTTCAGTT
GCTCCACTTTTTTGTCAGCACTTGATAACTGTCATATTCTTTTAGGAATTCTAATAGCTG
TATAGTGTTACCTCATTAGACTTTTAATTTTCCTACTATCTGAGGATGTTGAGCATCTTT
TTATACGTACATTTGAGGTCTGAATATCTTCTTTGGAGAAATGTTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTACTTTAATTAAATTTATTGAAGTACAATATATATACAGTAA
ATTCACCGCTTTTAATCTACAGTTCTGTGAGTTTTGACAATAATGTGACCATTACCACAC
TCAAGATATAGAACAGTTCTATCACCCAAAACATTATCTCATGTCTCTTCGTGGTCAATC
TTTGCCCCAACCCCTTAATCAATTCTCTTCCCTATGGTTTTGCCTTTTCCAGAATGTCAT
ATAAGCCTTTGTAGTGTAGGTTCTTTTTCTTACCATAATACATTTTAGATTCATACATTG
TGTGTCTATCAGAAGTTTGTTCCTTTTTATTGCTGAGTAGTATTCCATTACCTGGATGTA
TCCCAGTTTGTTTACATAGAAATGAAAGACATTTGACTTACGTCCAGTTTTTGGCAGTTG
TGAATAAACCTTCTCTATATATTCACATACAGGTTTTTGTGTAACGTTGAGTTTTCATTT
CTCTTGGGTGGCGATCATGCTGGGTAGTACAATAAATCTATTTTAACATTATAAGAAATT
TCCAAACACGTGTCTGCACCATATTTTATCCTCTCTCAGCGATACACGCAAGTTTCAGTT
GCTCCACTTTTTTGTCAGCACTTGATAACTGTCATATTCTTTTAGGAATTCTAATAGCTG
TATAGTGTTACCTCATTAGACTTTTAATTTTCCTACTATCTGAGGATGTTGAGCATCTTT
TTATACGTACATTTGAGGTCTGAATATCTTCTTTGGAGAAATGTTTAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               225-682, gnl|bosTau2|chr15 (11546909-11547376)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               225-682, gnl|bosTau2|chr15 (11546909-11547376)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               isp (0.451128)
               

               
               fat (0.147427)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.451128)
               

               
               fat (0.147427)