Non-Coding RNA Search

Ss1.1-risp14_d8.5

Sequence:


               
               CCTGAGAACTTGGCAGTGATGACCAGAAAGAACACCTTATTTTCTACTTATGGAAAACCT
ATCCAGAGCATTCAAAAGACCGTCTACAAATTCCTATTGAAACCTACGGAGAGCATAATT
AAAATGTTCTCTCTTCCTGAGAACACGGTGACATTTTCCAGATGTCTGATAAAGAAAGTA
AAATAACGTACCTGTGGTTACAAAGCAGGTTGAGAGATGGCTAGGAAAGCCCCTCTCAGA
TGCCTGTCTCCTGCAAGACCCTTCCTGATGGTGATAACCTGCTCCAGGTAGAGGAGTGCT
ACCAGGACCCACACGGACCATAAACCAGGTGATCAAGGTCAAGACCACTGTGTGATTCAT
GAACTGTCTTCTATTCTTTGGCTCTCACTTGCTTCATTAGTGAGATGAGGAATATGGATT
AGATATCCCTTACAGCAATAAAGTCATGTGACCATGACAAACAGTATCTTCAGACATCTG
CTTTCACAAGGCAGCCTATTTCCATTAAATGGACTGAACTATAAGCACAAATAATGTAGG
AATGGTTGCAAAACAAGGTATATATTAAGCAAATTTTGTCCCAGTCCCAGAAGGACAATG
CTGACCTAAAGAGATGCAAGGCCACATAGACAATAACGCAATTTTTTTTTTTAAGATGAA
AAATCAGAATAGAAAATAAGGTGCAGGAACTCTCTGTAAAGAAAATGTGAAAAACATATC
ATGGATAACTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGAGAACTTGGCAGTGATGACCAGAAAGAACACCTTATTTTCTACTTATGGAAAACCT
ATCCAGAGCATTCAAAAGACCGTCTACAAATTCCTATTGAAACCTACGGAGAGCATAATT
AAAATGTTCTCTCTTCCTGAGAACACGGTGACATTTTCCAGATGTCTGATAAAGAAAGTA
AAATAACGTACCTGTGGTTACAAAGCAGGTTGAGAGATGGCTAGGAAAGCCCCTCTCAGA
TGCCTGTCTCCTGCAAGACCCTTCCTGATGGTGATAACCTGCTCCAGGTAGAGGAGTGCT
ACCAGGACCCACACGGACCATAAACCAGGTGATCAAGGTCAAGACCACTGTGTGATTCAT
GAACTGTCTTCTATTCTTTGGCTCTCACTTGCTTCATTAGTGAGATGAGGAATATGGATT
AGATATCCCTTACAGCAATAAAGTCATGTGACCATGACAAACAGTATCTTCAGACATCTG
CTTTCACAAGGCAGCCTATTTCCATTAAATGGACTGAACTATAAGCACAAATAATGTAGG
AATGGTTGCAAAACAAGGTATATATTAAGCAAATTTTGTCCCAGTCCCAGAAGGACAATG
CTGACCTAAAGAGATGCAAGGCCACATAGACAATAACGCAATTTTTTTTTTTAAGATGAA
AAATCAGAATAGAAAATAAGGTGCAGGAACTCTCTGTAAAGAAAATGTGAAAAACATATC
ATGGATAACTGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-732, gnl|bosTau2|chr19 (2438579-2437869)
               

               
               1-732, gnl|Hg17|chr17 (10364112-10363370)
               

               
               1-732, gnl|Mm7|chr11 (67280193-67280882)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-732, gnl|bosTau2|chr19 (2438579-2437869)
               

               
               1-732, gnl|Hg17|chr17 (10364112-10363370)
               

               
               1-732, gnl|Mm7|chr11 (67280193-67280882)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               isp (0.300752)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.300752)

	1-732, gnl\|bosTau2\|chr19 (2438579-2437869)
	1-732, gnl\|Hg17\|chr17 (10364112-10363370)
	1-732, gnl\|Mm7\|chr11 (67280193-67280882)