Non-Coding RNA Search

Ss1.1-risp14_o4.5

Sequence:


               
               TGAATTGTAAGAGAATAAAACTTGTTTGAAAATTTGGAATAGTGCTGCTGCCAGCTTATT
TTTCTGGTACTTGTATTTTCACATGTTAAATGATCTTTATATATGTTGAATTAACAAATA
TTTTGAGTTTCTTGAGGGGGGAAAAAGCATATTAATGGTATTGAAATGTGTTAGTAGTTT
GGCTGTGTGCCCAAAACTCTGTTTTCGCAGCAGAAGTGGAGAACTGTATGTGAAGAAAGT
ATAACCATTATTTCTTTGTATTTTAGGGGCTTTAACCAGGACATCCTCTAGTTGGTGTTA
GGAATGTTTGCTTAATTTCCAGACTTTTTTTTAAAAACACATCGTGAGTTTTTTGAGGCT
CCAACCTGACTGATTAGTGCATGGTCAGCCATCAACTAAGGCTGAGGCATCTCTGACCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAATTGTAAGAGAATAAAACTTGTTTGAAAATTTGGAATAGTGCTGCTGCCAGCTTATT
TTTCTGGTACTTGTATTTTCACATGTTAAATGATCTTTATATATGTTGAATTAACAAATA
TTTTGAGTTTCTTGAGGGGGGAAAAAGCATATTAATGGTATTGAAATGTGTTAGTAGTTT
GGCTGTGTGCCCAAAACTCTGTTTTCGCAGCAGAAGTGGAGAACTGTATGTGAAGAAAGT
ATAACCATTATTTCTTTGTATTTTAGGGGCTTTAACCAGGACATCCTCTAGTTGGTGTTA
GGAATGTTTGCTTAATTTCCAGACTTTTTTTTAAAAACACATCGTGAGTTTTTTGAGGCT
CCAACCTGACTGATTAGTGCATGGTCAGCCATCAACTAAGGCTGAGGCATCTCTGACCGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-420, gnl|bosTau2|chr18 (47025933-47026344)
               

               
               1-420, gnl|Hg17|chr19 (52199619-52200032)
               

               
               1-420, gnl|Mm7|chr7 (14257121-14256695)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-420, gnl|bosTau2|chr18 (47025933-47026344)
               

               
               1-420, gnl|Hg17|chr19 (52199619-52200032)
               

               
               1-420, gnl|Mm7|chr7 (14257121-14256695)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               gul (0.177588)
               

               
               sin (0.174948)
               

               
               duo (0.172801)
               

               
               isp (0.150376)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               sin (0.174948)
               

               
               duo (0.172801)
               

               
               isp (0.150376)

	1-420, gnl\|bosTau2\|chr18 (47025933-47026344)
	1-420, gnl\|Hg17\|chr19 (52199619-52200032)
	1-420, gnl\|Mm7\|chr7 (14257121-14256695)