Ss1.1-risp22_l22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGAAACATGATGAGCAAGGAGAAGCGAGAGGCAGTCAGTAAAGAGGACCTCGCCAGAGC GACTTTGATCACCATCACCAACAACATTGGCTCAATAGCAAGAATGTGTGCCCTGAATGA AAATATCAACCAGGTGGTATTTGTTGGAAATTTCTTGAGAATTAATACGATCGCCATGCG GCTTTTGGCATATGCTTTGGATTATTGGTCCAAGGGACAGTTGAAAGCACTTTTTTCAGA ACACGAGGGTTATTTTGGAGCTGTTGGAGCCCTTCTTGAGCTGTTGAAGATACCCTGATA CCTGGGGAGAGGTTCCTGGAACTTTCCACAATGGGATCTGTGGACTTGTTTTTTTTTAAG AGACTCATTCAGTTTTATGATTGTGTGCTACCTGAATCAGAGCGAGAAAGGACGAGTGTA TTTTTCTAAGTCATCAAGATAAATCCTTAAAAATTCAGTCTAAACTAATAACCAGTAAGG AAAGATATATATTAAAAAAAAAGTGGACCATGTCCATGTTGGCGAGGATTCATTGTATTT AATTGCTCTTCACTGTAGCTTTGTTCAACGTGCTGTGTTAGTTTAAAATTCAGCATCACT CAGTGGAGCTGCTTCAGAGGAGACCTGTTCTGTGTTCTACCGCCTGTGACTTTGTGTCCC ATTGAAGTCGCTAAATGTAAGGAAGCTACTTTGTATTATAATCTAATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGAAACATGATGAGCAAGGAGAAGCGAGAGGCAGTCAGTAAAGAGGACCTCGCCAGAGC GACTTTGATCACCATCACCAACAACATTGGCTCAATAGCAAGAATGTGTGCCCTGAATGA AAATATCAACCAGGTGGTATTTGTTGGAAATTTCTTGAGAATTAATACGATCGCCATGCG GCTTTTGGCATATGCTTTGGATTATTGGTCCAAGGGACAGTTGAAAGCACTTTTTTCAGA ACACGAGGGTTATTTTGGAGCTGTTGGAGCCCTTCTTGAGCTGTTGAAGATACCCTGATA CCTGGGGAGAGGTTCCTGGAACTTTCCACAATGGGATCTGTGGACTTGTTTTTTTTTAAG AGACTCATTCAGTTTTATGATTGTGTGCTACCTGAATCAGAGCGAGAAAGGACGAGTGTA TTTTTCTAAGTCATCAAGATAAATCCTTAAAAATTCAGTCTAAACTAATAACCAGTAAGG AAAGATATATATTAAAAAAAAAGTGGACCATGTCCATGTTGGCGAGGATTCATTGTATTT AATTGCTCTTCACTGTAGCTTTGTTCAACGTGCTGTGTTAGTTTAAAATTCAGCATCACT CAGTGGAGCTGCTTCAGAGGAGACCTGTTCTGTGTTCTACCGCCTGTGACTTTGTGTCCC ATTGAAGTCGCTAAATGTAAGGAAGCTACTTTGTATTATAATCTAATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-121, gnl|bosTau2|chr13 (33902609-33902729) | |
| 1-121, gnl|canFam2|chr24 (20466440-20466256) | |
| 1-121, gnl|danRer3|chr12 (9810722-9810550) | |
| 1-121, gnl|dasNov1|scaffold_242043 (410-591) | |
| 1-121, gnl|echTel1|scaffold_186928 (3895-4076) | |
| 1-121, gnl|fr1|chrUn (280268760-280268900) | |
| 1-121, gnl|galGal2|chr4 (88525754-88525580) | |
| 1-121, gnl|hg17|chr20 (3845555-3845739) | |
| 1-121, gnl|Hg17|chr20 (3845577-3845697) | |
| 1-121, gnl|loxAfr1|scaffold_13982 (53081-53265) | |
| 1-121, gnl|mm7|chr2 (131028309-131028492) | |
| 1-121, gnl|Mm7|chr2 (131028330-131028450) | |
| 1-121, gnl|monDom2|scaffold_68 (183439-183624) | |
| 1-121, gnl|oryCun1|scaffold_165124 (21675-21489) | |
| 1-121, gnl|panTro1|chr21 (3821401-3821585) | |
| 1-121, gnl|rheMac2|chr10 (37252454-37252638) | |
| 1-121, gnl|rn3|chr3 (118901585-118901769) | |
| 1-121, gnl|tetNig1|chr10 (11916397-11916263) | |
| 1-121, gnl|xenTro1|scaffold_366 (1012435-1012598) | |
| 246-708, gnl|bosTau2|chr13 (33909101-33909572) | |
| 246-708, gnl|Hg17|chr20 (3851889-3852337) | |
| 246-708, gnl|Mm7|chr2 (131037124-131037532) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-121, gnl|bosTau2|chr13 (33902609-33902729) | |
| 1-121, gnl|canFam2|chr24 (20466440-20466256) | |
| 1-121, gnl|danRer3|chr12 (9810722-9810550) | |
| 1-121, gnl|dasNov1|scaffold_242043 (410-591) | |
| 1-121, gnl|echTel1|scaffold_186928 (3895-4076) | |
| 1-121, gnl|fr1|chrUn (280268760-280268900) | |
| 1-121, gnl|galGal2|chr4 (88525754-88525580) | |
| 1-121, gnl|hg17|chr20 (3845555-3845739) | |
| 1-121, gnl|Hg17|chr20 (3845577-3845697) | |
| 1-121, gnl|loxAfr1|scaffold_13982 (53081-53265) | |
| 1-121, gnl|mm7|chr2 (131028309-131028492) | |
| 1-121, gnl|Mm7|chr2 (131028330-131028450) | |
| 1-121, gnl|monDom2|scaffold_68 (183439-183624) | |
| 1-121, gnl|oryCun1|scaffold_165124 (21675-21489) | |
| 1-121, gnl|panTro1|chr21 (3821401-3821585) | |
| 1-121, gnl|rheMac2|chr10 (37252454-37252638) | |
| 1-121, gnl|rn3|chr3 (118901585-118901769) | |
| 1-121, gnl|tetNig1|chr10 (11916397-11916263) | |
| 1-121, gnl|xenTro1|scaffold_366 (1012435-1012598) | |
| 246-708, gnl|bosTau2|chr13 (33909101-33909572) | |
| 246-708, gnl|Hg17|chr20 (3851889-3852337) | |
| 246-708, gnl|Mm7|chr2 (131037124-131037532) |
| Expressed library(ies): 11 entry(ies) | More info |
| Expressed library(ies): 11 entry(ies) | Help | Less info |
| thg (0.253582) | |
| gul (0.177588) | |
| rec (0.17307) | |
| isp (0.150376) | |
| fat (0.147427) | |
| ski (0.146735) | |
| hyp (0.142837) | |
| csk (0.140746) | |
| lyg (0.133103) | |
| ute (0.132784) | |
| sug (0.127291) |
| Expressed library(ies): 11 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| thg (0.253582) | |
| gul (0.177588) | |
| rec (0.17307) | |
| isp (0.150376) | |
| fat (0.147427) | |
| ski (0.146735) | |
| hyp (0.142837) | |
| csk (0.140746) | |
| lyg (0.133103) | |
| ute (0.132784) | |
| sug (0.127291) |