Non-Coding RNA Search

Ss1.1-risp32_f4.5

Sequence:


               
               CAGCCCTAAAAACCAAAAAAAAAGGAATTTTACCACAAATCAAAAGCTGGAGGCACTTAA
ATTCTTAATGAATTTTATAGCAGTAGAAGAGGAATCATGTTTGTAATGGACCCTAAATGT
AAGTCATTTAAATTCTAGTGATAGGAAGAATTTAATACAGACCGTCTTCTTGGACTCAGC
TGTCAGCATTCTCGGTCAGTGTACACCAGGTTACTTGGAAACAGTAAAGAAGAAAGCCTT
CTGAGATTAATCGGAATGTTGATGTTCTAATAAGTTATAGCTCTGCCCATTTTTATTCCA
TCCTATTGTGCTCCATGGAGGACTGTGTTGGCTTTCTGTTGTAGCATGAATTTACATTTA
AATTCACAGTGCACAGTTTTGATTCTCTCCCTTAGGTTAAAAGTTTCACCTATATTTTAA
AGCTGTTTACATTTAAAGACAGACTATGAAAACTTAAGAGATGGCAGTCCTTTATCCTGG
TCAAATGAAGAATGATAAATTGAAAATGTGGGTTAATAATGATGCTAGATTTGGAAGCAT
TGTCTGCCATTTTTATAGATGATGCTTTTATTCGAGTAATGTAATAGACATGTACTTGAC
CATTTTTCTTACAGTAGTTTAATCAAATACAGGCATAGCTTGTTTTATTGGGCTTCTCAC
CTACTGTGTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCCCTAAAAACCAAAAAAAAAGGAATTTTACCACAAATCAAAAGCTGGAGGCACTTAA
ATTCTTAATGAATTTTATAGCAGTAGAAGAGGAATCATGTTTGTAATGGACCCTAAATGT
AAGTCATTTAAATTCTAGTGATAGGAAGAATTTAATACAGACCGTCTTCTTGGACTCAGC
TGTCAGCATTCTCGGTCAGTGTACACCAGGTTACTTGGAAACAGTAAAGAAGAAAGCCTT
CTGAGATTAATCGGAATGTTGATGTTCTAATAAGTTATAGCTCTGCCCATTTTTATTCCA
TCCTATTGTGCTCCATGGAGGACTGTGTTGGCTTTCTGTTGTAGCATGAATTTACATTTA
AATTCACAGTGCACAGTTTTGATTCTCTCCCTTAGGTTAAAAGTTTCACCTATATTTTAA
AGCTGTTTACATTTAAAGACAGACTATGAAAACTTAAGAGATGGCAGTCCTTTATCCTGG
TCAAATGAAGAATGATAAATTGAAAATGTGGGTTAATAATGATGCTAGATTTGGAAGCAT
TGTCTGCCATTTTTATAGATGATGCTTTTATTCGAGTAATGTAATAGACATGTACTTGAC
CATTTTTCTTACAGTAGTTTAATCAAATACAGGCATAGCTTGTTTTATTGGGCTTCTCAC
CTACTGTGTTTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               35-669, gnl|bosTau2|chr28 (20812040-20811394)
               

               
               35-669, gnl|Hg17|chr10 (73656832-73657509)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               35-669, gnl|bosTau2|chr28 (20812040-20811394)
               

               
               35-669, gnl|Hg17|chr10 (73656832-73657509)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               tbr (0.154178)
               

               
               isp (0.150376)
               

               
               bfe (0.149858)
               

               
               tra (0.123092)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               isp (0.150376)
               

               
               bfe (0.149858)
               

               
               tra (0.123092)

	35-669, gnl\|bosTau2\|chr28 (20812040-20811394)
	35-669, gnl\|Hg17\|chr10 (73656832-73657509)