Non-Coding RNA Search

Ss1.1-risp35_n19.5

Sequence:


               
               AGCTAGCCATCTTTGCTGCCAACACATGAGGAGCAAGGTAGTAGTTAATATGAGGTTGCC
AAATCTTCAAGTTTTCTAAAATGAGTGGGAGATCAGGTTTTTTATGTGCAAGAGTTTCTT
TTTAATGCTTTGTTGAGATATAATGTTCATGCAATAATAGGCTGTACTTATTAAATGTGT
ACAATCTAAGTTTTTAAATATGTATACACTCAGGGAGCCAACACTATAATTATGATAGTG
AACCTATCCCTCACCTGCAAAGCTACCTCATGCCCCTTTACTACCCCTCCTTGCCTTCCC
CAGGAAAACCATTGATTTACCTTTTTTCACTATAGATTTGTTTGCCTTTCTTAGAGTTTT
ATACAATTGGAATCATAAAGTATTTCTACTCTATTTTTTGACCTGTTTTCTTTCATAGAG
CATAATCATCTTGAGCATCATCCATTCTGTATATGTGAATAGTTCATTCCTTTTACTGCT
GAATAGTGCTCTACTGAATGAATATTTTTTTAATGAAAAAAAATCTTGTAAAATACACAA
CATAAATTTTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTAGCCATCTTTGCTGCCAACACATGAGGAGCAAGGTAGTAGTTAATATGAGGTTGCC
AAATCTTCAAGTTTTCTAAAATGAGTGGGAGATCAGGTTTTTTATGTGCAAGAGTTTCTT
TTTAATGCTTTGTTGAGATATAATGTTCATGCAATAATAGGCTGTACTTATTAAATGTGT
ACAATCTAAGTTTTTAAATATGTATACACTCAGGGAGCCAACACTATAATTATGATAGTG
AACCTATCCCTCACCTGCAAAGCTACCTCATGCCCCTTTACTACCCCTCCTTGCCTTCCC
CAGGAAAACCATTGATTTACCTTTTTTCACTATAGATTTGTTTGCCTTTCTTAGAGTTTT
ATACAATTGGAATCATAAAGTATTTCTACTCTATTTTTTGACCTGTTTTCTTTCATAGAG
CATAATCATCTTGAGCATCATCCATTCTGTATATGTGAATAGTTCATTCCTTTTACTGCT
GAATAGTGCTCTACTGAATGAATATTTTTTTAATGAAAAAAAATCTTGTAAAATACACAA
CATAAATTTTAC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-303, gnl|bosTau2|chr18 (40077011-40077306)
               

               
               1-303, gnl|Hg17|chr19 (40139474-40139187)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-303, gnl|bosTau2|chr18 (40077011-40077306)
               

               
               1-303, gnl|Hg17|chr19 (40139474-40139187)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mga (0.32041)
               

               
               isp (0.150376)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.32041)
               

               
               isp (0.150376)
               

               
               eje (0.0988338)

	1-303, gnl\|bosTau2\|chr18 (40077011-40077306)
	1-303, gnl\|Hg17\|chr19 (40139474-40139187)