Non-Coding RNA Search

Ss1.1-rjca01c_c9.5

Sequence:


               
               ACACAGGACCGCCAGCTGGCAGGGCAGCTGCTTAGACTGCGGGCGCAGCTGCACCGGCTG
AAGGTTGACCAAGCCTGTCACCTGCACCAAGAGTTGCTGAACGAGGCCGAGCTGGAGCTG
GAGCTGGAGCCTGGGGCCGGCCTGGCCCTGGCCCCGCCTCTGCGGCACCTGGGCCTCACG
CGCATGAACATCAGCGCCCGGCGCTTCACCCTCTGCTGAGGGCCACCTGCGTGACCCCTG
GGCCACCTGCTACCTCATCCCCTGCCCACCTGGGAAAAGAAAGGGAGGGGTGTCCCAGAG
GAGCCAGCACCTGGAAAGGGCGAGGGGAGAGATGGGGAGAGTCACTCAGTTCTCTGGGAG
CATAAAGCCCCAGCATCCTGTTGCTCCTGCTGCTGCGCATGGGGGTGGGGTGGGAGGAAG
GGGAGGAGCTCACAGACAGCCCTGCCCCAGGCTCCTCAATAAACCTCTGCTTCCCAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACAGGACCGCCAGCTGGCAGGGCAGCTGCTTAGACTGCGGGCGCAGCTGCACCGGCTG
AAGGTTGACCAAGCCTGTCACCTGCACCAAGAGTTGCTGAACGAGGCCGAGCTGGAGCTG
GAGCTGGAGCCTGGGGCCGGCCTGGCCCTGGCCCCGCCTCTGCGGCACCTGGGCCTCACG
CGCATGAACATCAGCGCCCGGCGCTTCACCCTCTGCTGAGGGCCACCTGCGTGACCCCTG
GGCCACCTGCTACCTCATCCCCTGCCCACCTGGGAAAAGAAAGGGAGGGGTGTCCCAGAG
GAGCCAGCACCTGGAAAGGGCGAGGGGAGAGATGGGGAGAGTCACTCAGTTCTCTGGGAG
CATAAAGCCCCAGCATCCTGTTGCTCCTGCTGCTGCGCATGGGGGTGGGGTGGGAGGAAG
GGGAGGAGCTCACAGACAGCCCTGCCCCAGGCTCCTCAATAAACCTCTGCTTCCCAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-476, gnl|bosTau2|chr2 (73533239-73533710)
               

               
               2-476, gnl|Hg17|chr1 (32383078-32383550)
               

               
               2-476, gnl|Mm7|chr4 (129021929-129021515)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-476, gnl|bosTau2|chr2 (73533239-73533710)
               

               
               2-476, gnl|Hg17|chr1 (32383078-32383550)
               

               
               2-476, gnl|Mm7|chr4 (129021929-129021515)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               jca (0.22792)
               

               
               cli (0.152812)
               

               
               pla (0.133672)
               

               
               cov (0.132153)
               

               
               cly (0.120642)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.22792)
               

               
               cli (0.152812)
               

               
               pla (0.133672)
               

               
               cov (0.132153)
               

               
               cly (0.120642)

	2-476, gnl\|bosTau2\|chr2 (73533239-73533710)
	2-476, gnl\|Hg17\|chr1 (32383078-32383550)
	2-476, gnl\|Mm7\|chr4 (129021929-129021515)

	jca (0.22792)
	cli (0.152812)
	pla (0.133672)
	cov (0.132153)
	cly (0.120642)