Non-Coding RNA Search

Ss1.1-rjca02c_m7.5

Sequence:


               
               TATGGTGGTTCCTAGCCCCACTGCCAAAAGCACTGTTTATGTCTTTGGTTGGTAAGTTTG
TGCTTTTTTTGTTTTTGTCCTTTA------------------------------------
------------------------------------------------------------
------------------------AAAGCAAAAACAAAACCAAAAAAAAGTAGAACTTGG
AAGACAGAAGGAGCCACGTGACTAGGGCCTTGTTTCATTTCTGAGCTGTTTTGAGGGAAC
TCTTGAAACTTCCTTTCTTTAGGGGAACCACCTGGCCACTGTGGGGAAATCATTGTGAAT
AAATGATTTATAGGGAAACCTCATCAGAGCTGCAGAGATTTCTCAGGTCCTTTGCAACCT
TGGACTCTAAAGACAACCGTTGCAAATGTTGTGCTGTCTCTTTGAGGTTGTTTGGGGACC
ATTTCCTCTTGATACCACAGTCATTCCTAACTTTTGAGGTCAGTGTTAGGTCAAAAGGTA
CTGCATTTAGGCGAGGGATGGGTCCACCAGTTTCCTGCAAAGACATAAACTGCACAGTGT
TTTTTAAACTTACGTTTTAAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGGTGGTTCCTAGCCCCACTGCCAAAAGCACTGTTTATGTCTTTGGTTGGTAAGTTTG
TGCTTTTTTTGTTTTTGTCCTTTA------------------------------------
------------------------------------------------------------
------------------------AAAGCAAAAACAAAACCAAAAAAAAGTAGAACTTGG
AAGACAGAAGGAGCCACGTGACTAGGGCCTTGTTTCATTTCTGAGCTGTTTTGAGGGAAC
TCTTGAAACTTCCTTTCTTTAGGGGAACCACCTGGCCACTGTGGGGAAATCATTGTGAAT
AAATGATTTATAGGGAAACCTCATCAGAGCTGCAGAGATTTCTCAGGTCCTTTGCAACCT
TGGACTCTAAAGACAACCGTTGCAAATGTTGTGCTGTCTCTTTGAGGTTGTTTGGGGACC
ATTTCCTCTTGATACCACAGTCATTCCTAACTTTTGAGGTCAGTGTTAGGTCAAAAGGTA
CTGCATTTAGGCGAGGGATGGGTCCACCAGTTTCCTGCAAAGACATAAACTGCACAGTGT
TTTTTAAACTTACGTTTTAAAATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               106-485, gnl|bosTau2|chr25 (11397690-11398068)
               

               
               106-485, gnl|Hg17|chr16 (19036469-19036835)
               

               
               106-485, gnl|Mm7|chr7 (114410816-114410507)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               106-485, gnl|bosTau2|chr25 (11397690-11398068)
               

               
               106-485, gnl|Hg17|chr16 (19036469-19036835)
               

               
               106-485, gnl|Mm7|chr7 (114410816-114410507)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	106-485, gnl\|bosTau2\|chr25 (11397690-11398068)
	106-485, gnl\|Hg17\|chr16 (19036469-19036835)
	106-485, gnl\|Mm7\|chr7 (114410816-114410507)