Ss1.1-rjca06c_j3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCAACGTGGACACCCCCTTGAAGGGCGGACTTAACACCCCCCTGCATGAGAGCGACTTC TCAGGTGTGACTCCCCAGCGGCAGGTAGTACAGACTCCAAACACAGTTCTCTCTACCCCG TTCAGAACTCCTTCTCATGGATCTGAAGGGCTGACTCCCCGAAGTGGGACAACTCCCAAA CCAGTTATTAACTCCACCCCGGGTAGAACTCCTCTTCGAGACAAGTTAAACATTAATCCC GAGGATGGAATGGCAGACTACAGTGACCCCTCTTATGTGAAGCAGATGGAAAGAGAATCT CGTGAACACCTTCGTTTAGGCTTGTTGGGCCTTCCTGCTCCTAAGAACGACTTTGAAATT GTTCTACCAGAAAATGCTGAGAAGGAACTGGAAGACCGTGAAGTAGATGATACTTATATT GAAGATGCTGCTGATGTGGATGCACGGAAGCAGGCCATACGAGAGGCAGAGCGTGTAAAG GAAATGAAACGAATGCACAAAGCTGTCCAGAAAGACCTGCCAAGACCATCAGAAGTCAAT GAAACTATTCTAAGACCCTTAAATGTAGAACCACCTCTAACAGATTTACAGAAAAGTGAA GAACTGATCAAAAAAGAAATGATCACAATGCTTCATTATGACCTTCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCAACGTGGACACCCCCTTGAAGGGCGGACTTAACACCCCCCTGCATGAGAGCGACTTC TCAGGTGTGACTCCCCAGCGGCAGGTAGTACAGACTCCAAACACAGTTCTCTCTACCCCG TTCAGAACTCCTTCTCATGGATCTGAAGGGCTGACTCCCCGAAGTGGGACAACTCCCAAA CCAGTTATTAACTCCACCCCGGGTAGAACTCCTCTTCGAGACAAGTTAAACATTAATCCC GAGGATGGAATGGCAGACTACAGTGACCCCTCTTATGTGAAGCAGATGGAAAGAGAATCT CGTGAACACCTTCGTTTAGGCTTGTTGGGCCTTCCTGCTCCTAAGAACGACTTTGAAATT GTTCTACCAGAAAATGCTGAGAAGGAACTGGAAGACCGTGAAGTAGATGATACTTATATT GAAGATGCTGCTGATGTGGATGCACGGAAGCAGGCCATACGAGAGGCAGAGCGTGTAAAG GAAATGAAACGAATGCACAAAGCTGTCCAGAAAGACCTGCCAAGACCATCAGAAGTCAAT GAAACTATTCTAAGACCCTTAAATGTAGAACCACCTCTAACAGATTTACAGAAAAGTGAA GAACTGATCAAAAAAGAAATGATCACAATGCTTCATTATGACCTTCTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 124-289, gnl|bosTau2|chr23 (17423504-17423339) | |
| 124-289, gnl|Hg17|chr6 (44498360-44498525) | |
| 124-289, gnl|Mm7|chr17 (43541396-43541231) | |
| 535-648, gnl|bosTau2|chr23 (17418739-17418626) | |
| 535-648, gnl|canFam2|chr12 (15808725-15809000) | |
| 535-648, gnl|danRer3|chrNA (36373281-36373019) | |
| 535-648, gnl|dasNov1|scaffold_131978 (1565-1840) | |
| 535-648, gnl|fr1|chrUn (179340538-179340794) | |
| 535-648, gnl|galGal2|chr3 (106752721-106753013) | |
| 535-648, gnl|hg17|chr6 (44502171-44502446) | |
| 535-648, gnl|Hg17|chr6 (44502197-44502310) | |
| 535-648, gnl|loxAfr1|scaffold_14802 (12660-12384) | |
| 535-648, gnl|mm7|chr17 (43537470-43537195) | |
| 535-648, gnl|Mm7|chr17 (43537442-43537329) | |
| 535-648, gnl|monDom2|scaffold_0 (196355437-196355155) | |
| 535-648, gnl|oryCun1|scaffold_185527 (81972-82246) | |
| 535-648, gnl|panTro1|chr5 (45112099-45112374) | |
| 535-648, gnl|rheMac2|chr4 (44351377-44351652) | |
| 535-648, gnl|rn3|chr9 (11185559-11185833) | |
| 535-648, gnl|tetNig1|chr17 (9232270-9232014) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 124-289, gnl|bosTau2|chr23 (17423504-17423339) | |
| 124-289, gnl|Hg17|chr6 (44498360-44498525) | |
| 124-289, gnl|Mm7|chr17 (43541396-43541231) | |
| 535-648, gnl|bosTau2|chr23 (17418739-17418626) | |
| 535-648, gnl|canFam2|chr12 (15808725-15809000) | |
| 535-648, gnl|danRer3|chrNA (36373281-36373019) | |
| 535-648, gnl|dasNov1|scaffold_131978 (1565-1840) | |
| 535-648, gnl|fr1|chrUn (179340538-179340794) | |
| 535-648, gnl|galGal2|chr3 (106752721-106753013) | |
| 535-648, gnl|hg17|chr6 (44502171-44502446) | |
| 535-648, gnl|Hg17|chr6 (44502197-44502310) | |
| 535-648, gnl|loxAfr1|scaffold_14802 (12660-12384) | |
| 535-648, gnl|mm7|chr17 (43537470-43537195) | |
| 535-648, gnl|Mm7|chr17 (43537442-43537329) | |
| 535-648, gnl|monDom2|scaffold_0 (196355437-196355155) | |
| 535-648, gnl|oryCun1|scaffold_185527 (81972-82246) | |
| 535-648, gnl|panTro1|chr5 (45112099-45112374) | |
| 535-648, gnl|rheMac2|chr4 (44351377-44351652) | |
| 535-648, gnl|rn3|chr9 (11185559-11185833) | |
| 535-648, gnl|tetNig1|chr17 (9232270-9232014) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| jca (0.22792) | |
| tes (0.207814) | |
| ssp (0.13552) | |
| med (0.116252) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jca (0.22792) | |
| tes (0.207814) | |
| ssp (0.13552) | |
| med (0.116252) |