Non-Coding RNA Search

Ss1.1-rjca09c_b9.5

Sequence:


               
               GGAGATCCTGGCTGCCCTGGAGAAAGGTGCAGCTCCCTGCCTGACCCGTACCAGAAGCAG
TGCGATCAGTTCGTGACGGAGTACGAGCCTGTGCTGGTTGAGATCCTGGTGGAGGTGATG
GAGCCGTCGTTCGTGTGCTCGAAAATTGGAGCCTGCCCTTCAGCCCATAAGCCTCTTTTG
GGAACTGAGAAGTGCGTCTGGGGCCCGAGCTTCTGGTGCCAGAACATGGAGTCGGCAGCC
CTGTGCAACGCTGTCGAGCACTGCAAGCGTCACGTGTGGAACTAGAAGGCACGTTCCATC
CTGGAGAAACTGCAGCATTTTTTCCTGCTTGTGTGTCTGGGGGAACGAACACATCGATCT
GTCGACTTTGTCCAAAAATAGCCCCCCCCTCCCCCCAGTCCCTTTCTTCTCTCCCTCATC
GTAGCGCTGCTGTGGGTGGGCTGCTGAAGTGGCCTCTTCAGGGTCCCTTTCCTCTGCTAG
AGATGATGCAAGACATTGGAAATAAACTGGAGGCGAACATCACTTTACTTCCCACTTAAA
CCATTTTCTTTTCTGGCCTACTTGCATCCCTACCCCCTATTTTCTTTTCATTATTTATTG
ACTCTAAGCAGAAGCAGTTCTCTGAATTGGATTGAACGACTCATTCGACAGTGAGGCTAG
CTGAAGAAGTGAGGCTGGGATGGGGTGGGGGATGTGAGGGCAATGAGGATCACCACTAGT
TCTAGATCGCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGATCCTGGCTGCCCTGGAGAAAGGTGCAGCTCCCTGCCTGACCCGTACCAGAAGCAG
TGCGATCAGTTCGTGACGGAGTACGAGCCTGTGCTGGTTGAGATCCTGGTGGAGGTGATG
GAGCCGTCGTTCGTGTGCTCGAAAATTGGAGCCTGCCCTTCAGCCCATAAGCCTCTTTTG
GGAACTGAGAAGTGCGTCTGGGGCCCGAGCTTCTGGTGCCAGAACATGGAGTCGGCAGCC
CTGTGCAACGCTGTCGAGCACTGCAAGCGTCACGTGTGGAACTAGAAGGCACGTTCCATC
CTGGAGAAACTGCAGCATTTTTTCCTGCTTGTGTGTCTGGGGGAACGAACACATCGATCT
GTCGACTTTGTCCAAAAATAGCCCCCCCCTCCCCCCAGTCCCTTTCTTCTCTCCCTCATC
GTAGCGCTGCTGTGGGTGGGCTGCTGAAGTGGCCTCTTCAGGGTCCCTTTCCTCTGCTAG
AGATGATGCAAGACATTGGAAATAAACTGGAGGCGAACATCACTTTACTTCCCACTTAAA
CCATTTTCTTTTCTGGCCTACTTGCATCCCTACCCCCTATTTTCTTTTCATTATTTATTG
ACTCTAAGCAGAAGCAGTTCTCTGAATTGGATTGAACGACTCATTCGACAGTGAGGCTAG
CTGAAGAAGTGAGGCTGGGATGGGGTGGGGGATGTGAGGGCAATGAGGATCACCACTAGT
TCTAGATCGCGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               250-489, gnl|bosTau2|chr28 (21185306-21185540)
               

               
               250-489, gnl|Hg17|chr10 (73247239-73246977)
               

               
               250-489, gnl|Mm7|chr10 (59819889-59820105)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               250-489, gnl|bosTau2|chr28 (21185306-21185540)
               

               
               250-489, gnl|Hg17|chr10 (73247239-73246977)
               

               
               250-489, gnl|Mm7|chr10 (59819889-59820105)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	250-489, gnl\|bosTau2\|chr28 (21185306-21185540)
	250-489, gnl\|Hg17\|chr10 (73247239-73246977)
	250-489, gnl\|Mm7\|chr10 (59819889-59820105)