Non-Coding RNA Search

Ss1.1-rjca10c_b21.5

Sequence:


               
               AAAACATTATGAAATGCTTGTTAGGGAAGAGTTGCAGAATTTCTTTTTTATACATTTCTG
TATTTTCTCACTTTTCTACAATGAACATATATTTCAACCCAGGAAAAAAAAAATTTAAGA
TTGGTAGCATAAAAAGCTATCCATACATGTGTTTTTCCTCTTAGTGGTCTTACTTATTTG
AATTTATCACTGCCCCATGTATCATGTTGCCAGCATTTCCACATTTAAGATTCTTTGTAA
TATGATTTCTATGGCTACCATAACATCTTGTCATATGCTGTCGCAGAATTTAGCTATCCC
TCTGCTCTTGGCCCAGATATTTCTCACTCTTGAAATGCTCTGATGAACTTCTTTATAGAT
GTTATTAGATGTTTTACATTTCTGAAAATAATGTATTAATATATAAAGCCCTCTACATGG
TATGGGAAGTTCCAGTCTTAGATGAATTTGATAATGTCCTTTTGACTTGACTTTCTCTCT
CAAAGACTGTATTTTCTTAAATTGTTTTAGCTAAGTAAAATATTACTTTTAAAAGAATGT
GCACTGGAACACTGTGAATTTGAGAAACATTTACAGATACCCATATTATCTTTCATGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAACATTATGAAATGCTTGTTAGGGAAGAGTTGCAGAATTTCTTTTTTATACATTTCTG
TATTTTCTCACTTTTCTACAATGAACATATATTTCAACCCAGGAAAAAAAAAATTTAAGA
TTGGTAGCATAAAAAGCTATCCATACATGTGTTTTTCCTCTTAGTGGTCTTACTTATTTG
AATTTATCACTGCCCCATGTATCATGTTGCCAGCATTTCCACATTTAAGATTCTTTGTAA
TATGATTTCTATGGCTACCATAACATCTTGTCATATGCTGTCGCAGAATTTAGCTATCCC
TCTGCTCTTGGCCCAGATATTTCTCACTCTTGAAATGCTCTGATGAACTTCTTTATAGAT
GTTATTAGATGTTTTACATTTCTGAAAATAATGTATTAATATATAAAGCCCTCTACATGG
TATGGGAAGTTCCAGTCTTAGATGAATTTGATAATGTCCTTTTGACTTGACTTTCTCTCT
CAAAGACTGTATTTTCTTAAATTGTTTTAGCTAAGTAAAATATTACTTTTAAAAGAATGT
GCACTGGAACACTGTGAATTTGAGAAACATTTACAGATACCCATATTATCTTTCATGCTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               168-600, gnl|bosTau2|chr10 (4353822-4354248)
               

               
               168-600, gnl|Hg17|chr5 (78976264-78976698)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               168-600, gnl|bosTau2|chr10 (4353822-4354248)
               

               
               168-600, gnl|Hg17|chr5 (78976264-78976698)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               jca (0.11396)

	168-600, gnl\|bosTau2\|chr10 (4353822-4354248)
	168-600, gnl\|Hg17\|chr5 (78976264-78976698)