Ss1.1-rjca10c_e19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGGCAACTCCCCTTAACTGGCAGTTAAGCACATCAGTACATTGCACCTCTACCGAACG GAACACTGGGATTCCATCTCTTCTCCAAGGAGCTTGACGGCATAAATCAGAAGCAAGCAG AGTTTGTCAGGTTTGAAGCCCCTATGATGGTATGTGTCAAATCAGTTGTAGCTAATTTGT CCAGGGAGAGTACTGGCTTCATTACTCTCGTGTAGTCGAGTTCTTCCAGCATCACCGCCG TTTAATAGAACATGATTAGTCATCACCGAGAAGAAAGCGTATTAGCTGAGGAGGTAGTTA CCCAGCACGCTCTGATGATTGCCACGATGTGATTGCAATACTCTTAGAAGCATCGTATTA TCCCAGACATGTTCTTTCGGGCCCTTGGAGCTCTCCTTACTAAATTCACTGTCATAATTT AGTATCTGTTTAATTTTTCAGTCCAAAGAGAGGAAATCAGTTGCTGAGTATTATTTGACT GCAGCCTCCTTGGTGCAAAAACAGAATGGAAAAAATAAATAAGAGTGACTTGGAATCTCA CAAGGAAAGCACGAATTCCGCTAACGACCACATTGCGAGCACACTGAGCACTCAAAGTCC ATGCGTAAAAAGCTCTTTCTCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGGCAACTCCCCTTAACTGGCAGTTAAGCACATCAGTACATTGCACCTCTACCGAACG GAACACTGGGATTCCATCTCTTCTCCAAGGAGCTTGACGGCATAAATCAGAAGCAAGCAG AGTTTGTCAGGTTTGAAGCCCCTATGATGGTATGTGTCAAATCAGTTGTAGCTAATTTGT CCAGGGAGAGTACTGGCTTCATTACTCTCGTGTAGTCGAGTTCTTCCAGCATCACCGCCG TTTAATAGAACATGATTAGTCATCACCGAGAAGAAAGCGTATTAGCTGAGGAGGTAGTTA CCCAGCACGCTCTGATGATTGCCACGATGTGATTGCAATACTCTTAGAAGCATCGTATTA TCCCAGACATGTTCTTTCGGGCCCTTGGAGCTCTCCTTACTAAATTCACTGTCATAATTT AGTATCTGTTTAATTTTTCAGTCCAAAGAGAGGAAATCAGTTGCTGAGTATTATTTGACT GCAGCCTCCTTGGTGCAAAAACAGAATGGAAAAAATAAATAAGAGTGACTTGGAATCTCA CAAGGAAAGCACGAATTCCGCTAACGACCACATTGCGAGCACACTGAGCACTCAAAGTCC ATGCGTAAAAAGCTCTTTCTCCCC |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 2-618, gnl|bosTau2|chr3 (82205870-82206484) | |
| 2-618, gnl|canFam2|chr25 (49996716-49997405) | |
| 2-618, gnl|canFam2|chr25 (49996716-49997405) | |
| 2-618, gnl|echTel1|scaffold_127603 (12-576) | |
| 2-618, gnl|echTel1|scaffold_127603 (12-576) | |
| 2-618, gnl|galGal2|chr7 (5112056-5111373) | |
| 2-618, gnl|galGal2|chr7 (5112056-5111373) | |
| 2-618, gnl|hg17|chr1 (176290149-176290752) | |
| 2-618, gnl|hg17|chr2 (236814943-236815575) | |
| 2-618, gnl|Hg17|chr2 (236815125-236815739) | |
| 2-618, gnl|mm7|chr1 (89793830-89794446) | |
| 2-618, gnl|mm7|chr1 (89793830-89794446) | |
| 2-618, gnl|Mm7|chr1 (89793996-89794612) | |
| 2-618, gnl|monDom2|scaffold_161 (1567168-1566611) | |
| 2-618, gnl|monDom2|scaffold_161 (1567168-1566611) | |
| 2-618, gnl|panTro1|chr1 (158684687-158685290) | |
| 2-618, gnl|panTro1|chr13 (127672513-127673149) | |
| 2-618, gnl|rheMac2|chr1 (191143610-191142979) | |
| 2-618, gnl|rheMac2|chr12 (100007073-100007708) | |
| 2-618, gnl|rn3|chr9 (89197216-89197832) | |
| 2-618, gnl|rn3|chr9 (89197216-89197832) | |
| 2-618, gnl|xenTro1|scaffold_49 (1899656-1900202) | |
| 2-618, gnl|xenTro1|scaffold_49 (1899649-1900202) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-618, gnl|bosTau2|chr3 (82205870-82206484) | |
| 2-618, gnl|canFam2|chr25 (49996716-49997405) | |
| 2-618, gnl|canFam2|chr25 (49996716-49997405) | |
| 2-618, gnl|echTel1|scaffold_127603 (12-576) | |
| 2-618, gnl|echTel1|scaffold_127603 (12-576) | |
| 2-618, gnl|galGal2|chr7 (5112056-5111373) | |
| 2-618, gnl|galGal2|chr7 (5112056-5111373) | |
| 2-618, gnl|hg17|chr1 (176290149-176290752) | |
| 2-618, gnl|hg17|chr2 (236814943-236815575) | |
| 2-618, gnl|Hg17|chr2 (236815125-236815739) | |
| 2-618, gnl|mm7|chr1 (89793830-89794446) | |
| 2-618, gnl|mm7|chr1 (89793830-89794446) | |
| 2-618, gnl|Mm7|chr1 (89793996-89794612) | |
| 2-618, gnl|monDom2|scaffold_161 (1567168-1566611) | |
| 2-618, gnl|monDom2|scaffold_161 (1567168-1566611) | |
| 2-618, gnl|panTro1|chr1 (158684687-158685290) | |
| 2-618, gnl|panTro1|chr13 (127672513-127673149) | |
| 2-618, gnl|rheMac2|chr1 (191143610-191142979) | |
| 2-618, gnl|rheMac2|chr12 (100007073-100007708) | |
| 2-618, gnl|rn3|chr9 (89197216-89197832) | |
| 2-618, gnl|rn3|chr9 (89197216-89197832) | |
| 2-618, gnl|xenTro1|scaffold_49 (1899656-1900202) | |
| 2-618, gnl|xenTro1|scaffold_49 (1899649-1900202) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| sag (0.182715) | |
| csp (0.161186) | |
| lun (0.150489) | |
| csk (0.140746) | |
| cov (0.132153) | |
| eru (0.120048) | |
| jca (0.11396) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sag (0.182715) | |
| csp (0.161186) | |
| lun (0.150489) | |
| csk (0.140746) | |
| cov (0.132153) | |
| eru (0.120048) | |
| jca (0.11396) |