Non-Coding RNA Search

Ss1.1-rjca10c_h24.5

Sequence:


               
               CTTTTCCGGTTGCAGCGCCGCGCGGTGAGGAGCTCTTGTCTAATCTGCAGCCATGCCTTC
CAAGGGTCCTCTACAGTCGGTGCAGGTCTTCGGACGCAAGGTAGGCTGGTCGCTCGATGG
TAGGGGTGAGGGCAGGAGAGAGACCTGTGGGCAGGGTTCTGAGGTCGACAGGGGAGCTGG
GGCCCAGATCTCACGTGGCTTCGCTGTCTTGGTTTCCGCAGAAGACAGCCACGGCCGTGG
CGCACTGCAAACGAGGTAACGGCCTCATCAAAGTGAACGGGCGACCCCTGGAGATGATCG
AGCCGCGCACGCTGCAATACAAGGTGCTGGGGTCGAGGACAGGCGTCTGGGTTGGGCGGA
GGGCTCTGGAGACGGAGATGTTGGAATAGGTCGGTTCCTGGAGTCCGTCGATCTCGGAAG
TTGAGGGGTCTGCAGTCAACAATGGGGAAGAAGCTAAATAGGGTACAGAAAAAGGGGTAT
TTGGCGATGGAGCTAGGTATTGAGGTTCCAGAGATGTTACAGAAGCTGGAATTGAGAGTG
AAGACGTGGATTTTGACGATTAAGCAGGTGCTTCTTGGGTTATTTGTTAGCTCGGTCTGT
TGGGAACCGGATGGCATAGGAGTTACCGATGTGGCCTGTTTTCTTTTCTTTTTTTTTGTT
TTCTTTTAAGTTAATGGGGGAGTGAGTGTGTTCATTTCTAGAGTATACACTGAGGACAGA
AATCAATATTTTGTTCTTCAAACATGGTGATTAGAGTTTGAATGTTGCAGTTTCTCAAGC
GTTTCCAGAATAAGCTTTGTTGTGCTTGGAGAGGAGTATCTCTCTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTCCGGTTGCAGCGCCGCGCGGTGAGGAGCTCTTGTCTAATCTGCAGCCATGCCTTC
CAAGGGTCCTCTACAGTCGGTGCAGGTCTTCGGACGCAAGGTAGGCTGGTCGCTCGATGG
TAGGGGTGAGGGCAGGAGAGAGACCTGTGGGCAGGGTTCTGAGGTCGACAGGGGAGCTGG
GGCCCAGATCTCACGTGGCTTCGCTGTCTTGGTTTCCGCAGAAGACAGCCACGGCCGTGG
CGCACTGCAAACGAGGTAACGGCCTCATCAAAGTGAACGGGCGACCCCTGGAGATGATCG
AGCCGCGCACGCTGCAATACAAGGTGCTGGGGTCGAGGACAGGCGTCTGGGTTGGGCGGA
GGGCTCTGGAGACGGAGATGTTGGAATAGGTCGGTTCCTGGAGTCCGTCGATCTCGGAAG
TTGAGGGGTCTGCAGTCAACAATGGGGAAGAAGCTAAATAGGGTACAGAAAAAGGGGTAT
TTGGCGATGGAGCTAGGTATTGAGGTTCCAGAGATGTTACAGAAGCTGGAATTGAGAGTG
AAGACGTGGATTTTGACGATTAAGCAGGTGCTTCTTGGGTTATTTGTTAGCTCGGTCTGT
TGGGAACCGGATGGCATAGGAGTTACCGATGTGGCCTGTTTTCTTTTCTTTTTTTTTGTT
TTCTTTTAAGTTAATGGGGGAGTGAGTGTGTTCATTTCTAGAGTATACACTGAGGACAGA
AATCAATATTTTGTTCTTCAAACATGGTGATTAGAGTTTGAATGTTGCAGTTTCTCAAGC
GTTTCCAGAATAAGCTTTGTTGTGCTTGGAGAGGAGTATCTCTCTTCC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-627, gnl|bosTau2|chr18 (43730246-43730894)
               

               
               1-627, gnl|Hg17|chr19 (44618428-44617826)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-627, gnl|bosTau2|chr18 (43730246-43730894)
               

               
               1-627, gnl|Hg17|chr19 (44618428-44617826)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               clu (0.119646)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)
               

               
               jca (0.11396)

	1-627, gnl\|bosTau2\|chr18 (43730246-43730894)
	1-627, gnl\|Hg17\|chr19 (44618428-44617826)