Ss1.1-rjca10c_o19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCGCGGGGAGCGGCGAGCCCAGCCTCAGACAAAGGGGCCGGCGGGGCCGAAGTCGCGCC GACCTCGAGTCCCCCCAGAGAAAGCACAAGTGCCACTATGCGGGCTGTGAGAAAGTTTAC GGGAAATCCTCGCACCTCAAGGCGCACCTGAGAACTCACACAGGTGAGAGGCCTTTCGCC TGCAGCTGGCAGGACTGCAACAAGAAGTTCGCGCGCTCCGATGAGCTGGCACGGCACTAC CGCACGCACACAGGCGAGAAGAAGTTCAGCTGCCCCATCTGCGACAAACGCTTCATGCGC AGCGACCACCTGACCAAGCACGCGCGCCGCCACGCCAACTTCCACCCGGGGATGCTGCAA CGGCGCGGCGGGGGCTCTCGGACCGGCTCGCTCAGCGACTACAGCCGCTCAGACGCCAGC AGCCCCACCATCAGCCCGGCAAGCTCGCCCTGAGCACCCGCGGAGCGGGGCGGGGTGGGG CGGGGCGGGGCAGGGCGGTGCGGGTCCTGCAGCACAGCCCGCCCCATCCAGAGGCACTGC CCCATTTCCCCCCCCCACCCCATGTGGGCCCGCCGGGTCCCAAGGCATGGCCCCGCCCCG CGGCACCGCCTGAGGACCCGCTGACCCTCACGACAGCCATGAGCAGATGCTCTCATTTCC TCCCGTGATTCTGTGTCTTTTCCTTTTGTAATAAGAATAGAGAGAACTTTATGAAGTCAA CAACAGCAACGAAAAAAACAATTTTCTTCACCTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCGCGGGGAGCGGCGAGCCCAGCCTCAGACAAAGGGGCCGGCGGGGCCGAAGTCGCGCC GACCTCGAGTCCCCCCAGAGAAAGCACAAGTGCCACTATGCGGGCTGTGAGAAAGTTTAC GGGAAATCCTCGCACCTCAAGGCGCACCTGAGAACTCACACAGGTGAGAGGCCTTTCGCC TGCAGCTGGCAGGACTGCAACAAGAAGTTCGCGCGCTCCGATGAGCTGGCACGGCACTAC CGCACGCACACAGGCGAGAAGAAGTTCAGCTGCCCCATCTGCGACAAACGCTTCATGCGC AGCGACCACCTGACCAAGCACGCGCGCCGCCACGCCAACTTCCACCCGGGGATGCTGCAA CGGCGCGGCGGGGGCTCTCGGACCGGCTCGCTCAGCGACTACAGCCGCTCAGACGCCAGC AGCCCCACCATCAGCCCGGCAAGCTCGCCCTGAGCACCCGCGGAGCGGGGCGGGGTGGGG CGGGGCGGGGCAGGGCGGTGCGGGTCCTGCAGCACAGCCCGCCCCATCCAGAGGCACTGC CCCATTTCCCCCCCCCACCCCATGTGGGCCCGCCGGGTCCCAAGGCATGGCCCCGCCCCG CGGCACCGCCTGAGGACCCGCTGACCCTCACGACAGCCATGAGCAGATGCTCTCATTTCC TCCCGTGATTCTGTGTCTTTTCCTTTTGTAATAAGAATAGAGAGAACTTTATGAAGTCAA CAACAGCAACGAAAAAAACAATTTTCTTCACCTCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 85-334, gnl|bosTau2|chr5 (20612097-20611848) | |
| 85-334, gnl|Hg17|chr12 (52008613-52008364) | |
| 85-334, gnl|Mm7|chr15 (102344710-102344461) | |
| 161-333, gnl|bosTau2|chr11 (66289983-66290155) | |
| 161-333, gnl|canFam2|chr17 (10020291-10020464) | |
| 161-333, gnl|danRer3|chr17 (24945970-24945795) | |
| 161-333, gnl|dasNov1|scaffold_34569 (9956-10129) | |
| 161-333, gnl|echTel1|scaffold_209413 (2055-2227) | |
| 161-333, gnl|fr1|chrUn (134319455-134319278) | |
| 161-333, gnl|galGal2|chr3 (94753626-94753799) | |
| 161-333, gnl|hg17|chr2 (10142938-10143111) | |
| 161-333, gnl|Hg17|chr2 (10142949-10143121) | |
| 161-333, gnl|loxAfr1|scaffold_24452 (36628-36800) | |
| 161-333, gnl|mm7|chr12 (22496674-22496841) | |
| 161-333, gnl|Mm7|chr12 (22496679-22496851) | |
| 161-333, gnl|monDom2|scaffold_1 (128163182-128163366) | |
| 161-333, gnl|oryCun1|scaffold_195253 (5946-6111) | |
| 161-333, gnl|panTro1|chr12 (10829096-10829269) | |
| 161-333, gnl|rheMac2|chr13 (10154300-10154473) | |
| 161-333, gnl|rn3|chr6 (42308538-42308704) | |
| 161-333, gnl|tetNig1|chr10 (5862337-5862177) | |
| 161-333, gnl|xenTro1|scaffold_469 (259860-260033) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 85-334, gnl|bosTau2|chr5 (20612097-20611848) | |
| 85-334, gnl|Hg17|chr12 (52008613-52008364) | |
| 85-334, gnl|Mm7|chr15 (102344710-102344461) | |
| 161-333, gnl|bosTau2|chr11 (66289983-66290155) | |
| 161-333, gnl|canFam2|chr17 (10020291-10020464) | |
| 161-333, gnl|danRer3|chr17 (24945970-24945795) | |
| 161-333, gnl|dasNov1|scaffold_34569 (9956-10129) | |
| 161-333, gnl|echTel1|scaffold_209413 (2055-2227) | |
| 161-333, gnl|fr1|chrUn (134319455-134319278) | |
| 161-333, gnl|galGal2|chr3 (94753626-94753799) | |
| 161-333, gnl|hg17|chr2 (10142938-10143111) | |
| 161-333, gnl|Hg17|chr2 (10142949-10143121) | |
| 161-333, gnl|loxAfr1|scaffold_24452 (36628-36800) | |
| 161-333, gnl|mm7|chr12 (22496674-22496841) | |
| 161-333, gnl|Mm7|chr12 (22496679-22496851) | |
| 161-333, gnl|monDom2|scaffold_1 (128163182-128163366) | |
| 161-333, gnl|oryCun1|scaffold_195253 (5946-6111) | |
| 161-333, gnl|panTro1|chr12 (10829096-10829269) | |
| 161-333, gnl|rheMac2|chr13 (10154300-10154473) | |
| 161-333, gnl|rn3|chr6 (42308538-42308704) | |
| 161-333, gnl|tetNig1|chr10 (5862337-5862177) | |
| 161-333, gnl|xenTro1|scaffold_469 (259860-260033) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jca (0.22792) |