Non-Coding RNA Search

Ss1.1-rjca11c_f4.5

Sequence:


               
               AGCAAAAGAAAACACGGAAGTATGCTATCATGAAGCGAATGCTTAGTCTCAGAGATCAGA
GACTGTGAGTGTCTGGAATCAACTGCGTTCGTAGACTGCCCAGAGATATAGGCGTCACCA
GGGGATAAGTAGTCAAAGTTTTTGTTGTTATTTGTGTGTATTTTTAATATTATTGTGCCT
TGGATTTATATAACGTAAAGTAGTAAAGTATAAAGTATGTGGTGAATGGGATGAGAATTC
AGCATCTCTTTAAGTGTTCAATTTGTGCGACAGGTTTTATATACTGTATCTGCCATGTCA
CATTTAAGCCTTCTAACAATTCTGTGAGGTGGTAGGATTATCCTTATGTTCTTGCTGTTG
CACGTATACTCCCAAGGAAAAAGATGTCGTATGATTGTTGAAAGACCGTGAGGTCAGAAA
CCAGTTTTCCTGTGCAGCCAGCACCTGACACTCAAGTATTTTCGAAGGAAAAAATAGGAA
GACTCCTAGATGTCTCCATTTTATAAATCTTCTAAGAAGATTTATGATAGCAACAACAAC
AACAAGACAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAAAAGAAAACACGGAAGTATGCTATCATGAAGCGAATGCTTAGTCTCAGAGATCAGA
GACTGTGAGTGTCTGGAATCAACTGCGTTCGTAGACTGCCCAGAGATATAGGCGTCACCA
GGGGATAAGTAGTCAAAGTTTTTGTTGTTATTTGTGTGTATTTTTAATATTATTGTGCCT
TGGATTTATATAACGTAAAGTAGTAAAGTATAAAGTATGTGGTGAATGGGATGAGAATTC
AGCATCTCTTTAAGTGTTCAATTTGTGCGACAGGTTTTATATACTGTATCTGCCATGTCA
CATTTAAGCCTTCTAACAATTCTGTGAGGTGGTAGGATTATCCTTATGTTCTTGCTGTTG
CACGTATACTCCCAAGGAAAAAGATGTCGTATGATTGTTGAAAGACCGTGAGGTCAGAAA
CCAGTTTTCCTGTGCAGCCAGCACCTGACACTCAAGTATTTTCGAAGGAAAAAATAGGAA
GACTCCTAGATGTCTCCATTTTATAAATCTTCTAAGAAGATTTATGATAGCAACAACAAC
AACAAGACAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-487, gnl|bosTau2|chr10 (56319045-56319554)
               

               
               1-487, gnl|Hg17|chr14 (74249945-74250440)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-487, gnl|bosTau2|chr10 (56319045-56319554)
               

               
               1-487, gnl|Hg17|chr14 (74249945-74250440)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ese (0.126502)
               

               
               ebs (0.118301)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)
               

               
               ebs (0.118301)
               

               
               jca (0.11396)

	1-487, gnl\|bosTau2\|chr10 (56319045-56319554)
	1-487, gnl\|Hg17\|chr14 (74249945-74250440)