Non-Coding RNA Search

Ss1.1-rjca15c_n11.5

Sequence:


               
               TACCTAAAGCAGTGGTTCTCAAGATGTGGTCTACCAGTCACTGGAAATCCCTTGAGCTTT
CTGGGGGACCAAGAGGTCTCTGCTTGGCACCTTGGCAGGAAGCAAGGCAGTGACACCAAA
TTCTACAGTTGTGTCTCTGTGCCTTGCTCTCACAGTAAAAATACTGCCAACATCACTGTG
AAATGTCCTCAAGAGAGCCAATAAAAGTAAGTGTATGAAATTTGGACCCTAGAGTAACAT
TCTGATGATGGGAAGCACGCCTAAGCACTCATGCCCCCTGCAGAGCGGTCATCTTGAGGA
AAAGCACTTGTGCAGTTGCAAGCTGAATCAGCTGTGTTCTTCACAGCATATTTTCCACTT
CAAGGAACTAGCAAATTATAGTATTTCTATTAGGAGACATTTTCTGGTAAATGAATCAAA
TGAGCCTTTCACTTCAAGGGAAACTGATAGTTTTGCCAATGATAAAACGAAAGCCTTCAA
GCAAAAATCAGAATTTTTGAAAACTTGTATTGCCGCCATGAGCTTGCCATCTTCCCAACA
TGTAGACTTTTCTGAGGGGATTGGTGGTGATATGAACAAATGTGATTTGTATGATGAAGT
GTGTTGTTTGGAAGATTTGCATAATTCAGTGAATGAACATTTTCCAAATGACTAATGCAC
GATGTTACAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACCTAAAGCAGTGGTTCTCAAGATGTGGTCTACCAGTCACTGGAAATCCCTTGAGCTTT
CTGGGGGACCAAGAGGTCTCTGCTTGGCACCTTGGCAGGAAGCAAGGCAGTGACACCAAA
TTCTACAGTTGTGTCTCTGTGCCTTGCTCTCACAGTAAAAATACTGCCAACATCACTGTG
AAATGTCCTCAAGAGAGCCAATAAAAGTAAGTGTATGAAATTTGGACCCTAGAGTAACAT
TCTGATGATGGGAAGCACGCCTAAGCACTCATGCCCCCTGCAGAGCGGTCATCTTGAGGA
AAAGCACTTGTGCAGTTGCAAGCTGAATCAGCTGTGTTCTTCACAGCATATTTTCCACTT
CAAGGAACTAGCAAATTATAGTATTTCTATTAGGAGACATTTTCTGGTAAATGAATCAAA
TGAGCCTTTCACTTCAAGGGAAACTGATAGTTTTGCCAATGATAAAACGAAAGCCTTCAA
GCAAAAATCAGAATTTTTGAAAACTTGTATTGCCGCCATGAGCTTGCCATCTTCCCAACA
TGTAGACTTTTCTGAGGGGATTGGTGGTGATATGAACAAATGTGATTTGTATGATGAAGT
GTGTTGTTTGGAAGATTTGCATAATTCAGTGAATGAACATTTTCCAAATGACTAATGCAC
GATGTTACAAGA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               1-661, gnl|bosTau2|chr11 (1741764-1741109)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-661, gnl|bosTau2|chr11 (1741764-1741109)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               tbr (0.308356)
               

               
               eru (0.120048)
               

               
               jca (0.11396)
               

               
               cty (0.10408)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.308356)
               

               
               eru (0.120048)
               

               
               jca (0.11396)
               

               
               cty (0.10408)