Non-Coding RNA Search

Ss1.1-rjca16c_g14.5

Sequence:


               
               TTGAAACAGATTTCAGGCGTTTATTTTTTCTTTATTTGAACTGAGGGAATGACACAGTTT
CCTTTCCAGATTCGTCTCTTGGATTTAGGCTCCTATCTCTACGAATCATTAGCTCTCTAT
TTTATTACATACAGTTCTTCGAGAAAATGCATAATAATGGCCTTTGTGAATGGGTCTTTC
CACGTTCATCACTGCTCCTCCCATTAAAATAAGTGTGTGTTTTTTAATCTACTCCAGTAT
CGTAAGTAGATCTTAAATCAGTGATGGGTTCCCTTTATCGTAGAAAGTACAATCTGCTGT
TAAAATGTCTGCTTTTAGAAACTGTGCTCATGGTCTCCGGAGACCTAAAAATGAGGTCTT
ACTCTTAGAACCGGAATAAAGAGGAAATAATGAACCTTGGAAATTACAAAGGAAAGGGGA
GGTTTCATGCTCTCTGTCCTTCCTTAGAATCCGTTCAAGAGCTTTTCAAATGTGGCGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGAAACAGATTTCAGGCGTTTATTTTTTCTTTATTTGAACTGAGGGAATGACACAGTTT
CCTTTCCAGATTCGTCTCTTGGATTTAGGCTCCTATCTCTACGAATCATTAGCTCTCTAT
TTTATTACATACAGTTCTTCGAGAAAATGCATAATAATGGCCTTTGTGAATGGGTCTTTC
CACGTTCATCACTGCTCCTCCCATTAAAATAAGTGTGTGTTTTTTAATCTACTCCAGTAT
CGTAAGTAGATCTTAAATCAGTGATGGGTTCCCTTTATCGTAGAAAGTACAATCTGCTGT
TAAAATGTCTGCTTTTAGAAACTGTGCTCATGGTCTCCGGAGACCTAAAAATGAGGTCTT
ACTCTTAGAACCGGAATAAAGAGGAAATAATGAACCTTGGAAATTACAAAGGAAAGGGGA
GGTTTCATGCTCTCTGTCCTTCCTTAGAATCCGTTCAAGAGCTTTTCAAATGTGGCGGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-480, gnl|bosTau2|chr17 (33236868-33237360)
               

               
               1-480, gnl|Hg17|chr12 (116046021-116045512)
               

               
               1-480, gnl|Mm7|chr5 (117237663-117238118)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr17 (33236868-33237360)
               

               
               1-480, gnl|Hg17|chr12 (116046021-116045512)
               

               
               1-480, gnl|Mm7|chr5 (117237663-117238118)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	1-480, gnl\|bosTau2\|chr17 (33236868-33237360)
	1-480, gnl\|Hg17\|chr12 (116046021-116045512)
	1-480, gnl\|Mm7\|chr5 (117237663-117238118)