Non-Coding RNA Search

Ss1.1-rjca31c_f1.5

Sequence:


               
               GATCTCAAAACCTTTCTTGCTGTTTGTAACTTATCTTAATAATTGAAATGTTATTCATGG
GTGTCAAGAATTTATTTACATTTGGAAGTATTATATATGATAAAGTGAATGATTGAATTG
CATTAAATTATTTGGGGATTCAGGAGTTCCCGTCATGGCGCAGCGGGTACGAATCTGACT
AGGAACCATGAGGTTGCGAGTTCGATCTCTGGCCTTGCTCGGTAGGTTAAGGATCCAGCA
TTGCCGTGAGCTGTGGTATAGGTCACAGACTCAGCTTGGATCTGGCGTTGCTGTGGCATA
GGCCAGGTACTGTAGCTCTGATTAGACCCCTAGCCTGGGAACTTTCATATGCTGCAGATG
CGGCCATAAAATGTGAAAAATATATATAATTCAGTGATCATCAGGGAAGCAGGTTGGGAA
GAGCTACCTGTCTTTGGATGTTTTCTTATCTCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATCTCAAAACCTTTCTTGCTGTTTGTAACTTATCTTAATAATTGAAATGTTATTCATGG
GTGTCAAGAATTTATTTACATTTGGAAGTATTATATATGATAAAGTGAATGATTGAATTG
CATTAAATTATTTGGGGATTCAGGAGTTCCCGTCATGGCGCAGCGGGTACGAATCTGACT
AGGAACCATGAGGTTGCGAGTTCGATCTCTGGCCTTGCTCGGTAGGTTAAGGATCCAGCA
TTGCCGTGAGCTGTGGTATAGGTCACAGACTCAGCTTGGATCTGGCGTTGCTGTGGCATA
GGCCAGGTACTGTAGCTCTGATTAGACCCCTAGCCTGGGAACTTTCATATGCTGCAGATG
CGGCCATAAAATGTGAAAAATATATATAATTCAGTGATCATCAGGGAAGCAGGTTGGGAA
GAGCTACCTGTCTTTGGATGTTTTCTTATCTCAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-143, gnl|bosTau2|chr19 (39274384-39274518)
               

               
               1-143, gnl|Hg17|chr17 (57880177-57880331)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-143, gnl|bosTau2|chr19 (39274384-39274518)
               

               
               1-143, gnl|Hg17|chr17 (57880177-57880331)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cki (0.165235)
               

               
               csk (0.140746)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               csk (0.140746)
               

               
               jca (0.11396)

	1-143, gnl\|bosTau2\|chr19 (39274384-39274518)
	1-143, gnl\|Hg17\|chr17 (57880177-57880331)