Non-Coding RNA Search

Ss1.1-rjej03b_b15.5

Sequence:


               
               ATGAGTGTGACTGCGGGCTGCTCCGTGATCACATCCTGCCTCCATCTTCCATCTATCCCA
GTGTCCTGGTGAGACCCTTGGGCAGCAGCTGGGGACAGGAGTGTTTCCTCAATTTACACA
TGGACCCACAATGTCATTTAGAGCCGAAAGTCTATATTTTTAGGATTCAAGTCAGACTCT
GAACTGTTTATAGGGTCACACAATGCAGTTTCCCTTCTCTCTGCTCTCCTCCCTTCTCAG
GCCTCTGGACAGGAACGTAAAGTTAGCAAAACAAGCCAGAAGACCACAGATGATTTAAAT
TTGAGCACCTCTGAGGCTCTGCGGGTACAGGGCTAAGAGGCTCGGGCTTTGTGGTGGGGA
CCTCATGGGGGGGAATAAAGTGGGAAACTTGGGGAATGGGGCCTGCTCTCCAGAAGCCCC
TCCCTGGTAGAGGAAGGGAGAACCTCGTGGGGGGAATGCCAGCCCTCTGCCCCTGTCTTC
AGGGCCCCTCCTCACTCTGGCAAAATCTTGCTTTCCTTATTTTCTTCCCTCAATGCAGAT
TGACCCCGTTTCTAACACGCACCCACTTCTGGTCTTTGTCAACCCCAAGAGTGGCGGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGAGTGTGACTGCGGGCTGCTCCGTGATCACATCCTGCCTCCATCTTCCATCTATCCCA
GTGTCCTGGTGAGACCCTTGGGCAGCAGCTGGGGACAGGAGTGTTTCCTCAATTTACACA
TGGACCCACAATGTCATTTAGAGCCGAAAGTCTATATTTTTAGGATTCAAGTCAGACTCT
GAACTGTTTATAGGGTCACACAATGCAGTTTCCCTTCTCTCTGCTCTCCTCCCTTCTCAG
GCCTCTGGACAGGAACGTAAAGTTAGCAAAACAAGCCAGAAGACCACAGATGATTTAAAT
TTGAGCACCTCTGAGGCTCTGCGGGTACAGGGCTAAGAGGCTCGGGCTTTGTGGTGGGGA
CCTCATGGGGGGGAATAAAGTGGGAAACTTGGGGAATGGGGCCTGCTCTCCAGAAGCCCC
TCCCTGGTAGAGGAAGGGAGAACCTCGTGGGGGGAATGCCAGCCCTCTGCCCCTGTCTTC
AGGGCCCCTCCTCACTCTGGCAAAATCTTGCTTTCCTTATTTTCTTCCCTCAATGCAGAT
TGACCCCGTTTCTAACACGCACCCACTTCTGGTCTTTGTCAACCCCAAGAGTGGCGGGAA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-375, gnl|bosTau2|chr5 (33660550-33660174)
               

               
               1-375, gnl|Hg17|chr12 (54620706-54621100)
               


               
               420-600, gnl|bosTau2|chr5 (33660155-33659970)
               

               
               420-600, gnl|Hg17|chr12 (54621139-54621364)
               

               
               420-600, gnl|Mm7|chr10 (128231865-128231655)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-375, gnl|bosTau2|chr5 (33660550-33660174)
               

               
               1-375, gnl|Hg17|chr12 (54620706-54621100)
               


               
               420-600, gnl|bosTau2|chr5 (33660155-33659970)
               

               
               420-600, gnl|Hg17|chr12 (54621139-54621364)
               

               
               420-600, gnl|Mm7|chr10 (128231865-128231655)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               jej (0.197844)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)

	1-375, gnl\|bosTau2\|chr5 (33660550-33660174)
	1-375, gnl\|Hg17\|chr12 (54620706-54621100)

	420-600, gnl\|bosTau2\|chr5 (33660155-33659970)
	420-600, gnl\|Hg17\|chr12 (54621139-54621364)
	420-600, gnl\|Mm7\|chr10 (128231865-128231655)