Non-Coding RNA Search

Ss1.1-rjej03b_j2.5

Sequence:


               
               GGGTGGGTTGAGTTTCCCATGGGCCAGGAGCTCAGCTGAGTTCCTCCTGGTCTTCCACAG
GAAGTGTTCACGGAACTGCAGGAGAAGTACGGGGAGATTGAAGAGATGAATGTGTGCGAC
AACTTGGGGGATCACCTCGTGGGCAATGTTTATGTCAAGGTGCCTCGTGTTCCCCCATTA
GAGCCCAGAGGTGGAGGCATTTCAATGCCTAACGGCCACCACAGCTAGAGGCCCATCACT
AAAGCCAGTCTGGCCCCTGAACTGCTAGCTAATCCCCTGAAGATGTCTGAGTTTGATTGC
TGACCCAGACCAACTTTCCCTCAGTTTCGGCGGGAGGAGGATGCAGAGCGGGCAGTGGCT
GAACTCAATAACCGCTGGTTCAATGGGCAGGCTGTGCATGCCGAGCTGTCTCCAGTCACT
GACTTCCGGGAATCATGCTGTCGACAGTATGAGATGGGGTATGGTAGTACAGGGGTTGGA
TGGGCACCTGGAGTCCCAGCCTTGTGTGTGTTTTGGGCCTGTCAGTCACAATGGCCTCAT
CCATCCATCCTCTACCCAGGGAATGCACCCGCGGTGGTTTCTGCAACTTCATGCACCTGC
GACCCATCTCCCGCAACCTTCGACGGCAGCTCTATGGGCGGGGACCCAGGCGCAGGTACC
TTAAGACTGACCAGCCTGCCAAGACTTCTCATGTGCCAAGGTCCCTAAACCTTCAGAGGA
GTCTGATCCTATGCCCCAATAAGTGTCTTGGGTCTTTTGTGCCCTAAGACTAGCCCTGAG
GCCATCTCAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTGGGTTGAGTTTCCCATGGGCCAGGAGCTCAGCTGAGTTCCTCCTGGTCTTCCACAG
GAAGTGTTCACGGAACTGCAGGAGAAGTACGGGGAGATTGAAGAGATGAATGTGTGCGAC
AACTTGGGGGATCACCTCGTGGGCAATGTTTATGTCAAGGTGCCTCGTGTTCCCCCATTA
GAGCCCAGAGGTGGAGGCATTTCAATGCCTAACGGCCACCACAGCTAGAGGCCCATCACT
AAAGCCAGTCTGGCCCCTGAACTGCTAGCTAATCCCCTGAAGATGTCTGAGTTTGATTGC
TGACCCAGACCAACTTTCCCTCAGTTTCGGCGGGAGGAGGATGCAGAGCGGGCAGTGGCT
GAACTCAATAACCGCTGGTTCAATGGGCAGGCTGTGCATGCCGAGCTGTCTCCAGTCACT
GACTTCCGGGAATCATGCTGTCGACAGTATGAGATGGGGTATGGTAGTACAGGGGTTGGA
TGGGCACCTGGAGTCCCAGCCTTGTGTGTGTTTTGGGCCTGTCAGTCACAATGGCCTCAT
CCATCCATCCTCTACCCAGGGAATGCACCCGCGGTGGTTTCTGCAACTTCATGCACCTGC
GACCCATCTCCCGCAACCTTCGACGGCAGCTCTATGGGCGGGGACCCAGGCGCAGGTACC
TTAAGACTGACCAGCCTGCCAAGACTTCTCATGTGCCAAGGTCCCTAAACCTTCAGAGGA
GTCTGATCCTATGCCCCAATAAGTGTCTTGGGTCTTTTGTGCCCTAAGACTAGCCCTGAG
GCCATCTCAAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-791, gnl|bosTau2|chr18 (36891300-36890484)
               

               
               1-791, gnl|Hg17|chr19 (40927217-40925783)
               

               
               1-791, gnl|Mm7|chr7 (27505369-27506125)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-791, gnl|bosTau2|chr18 (36891300-36890484)
               

               
               1-791, gnl|Hg17|chr19 (40927217-40925783)
               

               
               1-791, gnl|Mm7|chr7 (27505369-27506125)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               jej (0.197844)
               

               
               cst (0.140036)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)
               

               
               cst (0.140036)

	1-791, gnl\|bosTau2\|chr18 (36891300-36890484)
	1-791, gnl\|Hg17\|chr19 (40927217-40925783)
	1-791, gnl\|Mm7\|chr7 (27505369-27506125)