Non-Coding RNA Search

Ss1.1-rjej04b_k1.5

Sequence:


               
               AATTTCTTGCTCCTTTGCTAAGACTCAATATAAACTCAAGTTCTAACCAAGCCTTTGAGT
TTCTCATCTCTGAGTACTCCCATGTGTTACACATGTAGGTTAATAAACTTCTGTTTGCTT
TGCTCTTGTTAATCTGTATTTCATCAGTCCAGTTTATAGGGCCCCAAGCAGAGAACCTAA
GATGGGTAATGAAAGAGATTTTTCCTCCCCAATGGGAATATGTTGAACAGAAATAATTAT
AAACATGTTAGCTAAAGTAACATCAGTGTATATACAATTATATGTAATAGACATGTAGCA
GTGTGTTTATATATATACACAATATGCAATGTATACAGTATATAAATGTATCAATGCAAC
ACATTGTATACTCTAAACTTATGCAATTACTCAATTATATCTCAATTTAAAACACTTTTT
GTTTAAAATGTAAGAAGATAAAATAAAAATGTTTCAGGTGAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTTCTTGCTCCTTTGCTAAGACTCAATATAAACTCAAGTTCTAACCAAGCCTTTGAGT
TTCTCATCTCTGAGTACTCCCATGTGTTACACATGTAGGTTAATAAACTTCTGTTTGCTT
TGCTCTTGTTAATCTGTATTTCATCAGTCCAGTTTATAGGGCCCCAAGCAGAGAACCTAA
GATGGGTAATGAAAGAGATTTTTCCTCCCCAATGGGAATATGTTGAACAGAAATAATTAT
AAACATGTTAGCTAAAGTAACATCAGTGTATATACAATTATATGTAATAGACATGTAGCA
GTGTGTTTATATATATACACAATATGCAATGTATACAGTATATAAATGTATCAATGCAAC
ACATTGTATACTCTAAACTTATGCAATTACTCAATTATATCTCAATTTAAAACACTTTTT
GTTTAAAATGTAAGAAGATAAAATAAAAATGTTTCAGGTGAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-257, gnl|bosTau2|chr1 (39297097-39296834)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-257, gnl|bosTau2|chr1 (39297097-39296834)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               rec (0.692281)
               

               
               sin (0.524843)
               

               
               jej (0.296765)
               

               
               ill (0.175593)
               

               
               duo (0.172801)
               

               
               lin (0.145603)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.692281)
               

               
               sin (0.524843)
               

               
               jej (0.296765)
               

               
               ill (0.175593)
               

               
               duo (0.172801)
               

               
               lin (0.145603)

	rec (0.692281)
	sin (0.524843)
	jej (0.296765)
	ill (0.175593)
	duo (0.172801)
	lin (0.145603)